Gene Cagg_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1913 
Symbol 
ID7266404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2345575 
End bp2346636 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID643566750 
Producthistidine kinase 
Protein accessionYP_002463244 
Protein GI219848811 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000343654 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0175391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGCG AAGAAGTTCA ACAGCAGATC ACTACAGCAA TCCAAACGTA CCGCGAAGAG 
ATCGACCGCA TTCGCCGTGA GCTTAACGAG GTTGAATCGT TGCTGCGACA AGGCATGGCT
GAAGTCGACA AACTCTCGAT GCGCGAAACT TCGATTGCCA ATCGCGTGCG CGATCTCGAT
GTCAATCTCG AACGGTACGA GAAGACCGAT ATCAAGACGT TTTATACCAC ATTGATCGAA
GTGCAAATGC GCTTACAAAC CATGCGGGCC CAGGTCGAGC AACTCCAAAC GCGCCGCGAG
ACGTTACGGG ACCGCCAGAG TTTAATCGGT GAGTTCGTTG AATTGCTCGA AGCAGCGGCG
GCGCAATTGG AGCGCAGTGC CAAGATCGTC GATCTGCCGT TCGATCCACA GACCATGATC
GCCAACATCA TCCAATCGCA AGAGAGCGAA CGGTTACGCA TTTCCCTGCA AATGCACGAC
GGCCCGGCGC AGGCAATGAG TAACCTCGTG TTGCGGGCCG AAATTTGCCA ACGTCTCCTC
GATCGCGATC TCGATCAAGC TCGCGCCGAA TTAGTAGCGC TGAAGAATGC CGTCAATAAC
ACGTTACAAG AGACGCGCAA ATTCATCTTC GATCTGCGGC CAATGACCCT CGACGACCTT
GGGCTAGTTC CAACCCTACG TCGCTACGTT GCGCAAATCT CCGAGAAACA CAAGATCGAT
CTAAACTTGA TGATACAAAA TCTTGATCAA CGCCTGCCCG GTCACTACGA AGTGACGATC
TTCCGCTTCA TTCAAGAAGC GATTAATAAC GTAGTGCGCC ATTCCGGGGC GACCCAAGCC
CGGATCATGC TCGATAACAG CGATAATACC TTGCACATCC TGATTGAGGA TAACGGCAGT
GGCTTTGCCG TGCAAGACGC GATTGCCAGC GCTGGCACGC GCAAGAATAT GGGTTTGGCC
AACATGCGCC AGCAGATCGA GGTCTTGCTC CAAGGCGAGT TCGGCATCGA GAGCACGATC
GGGCGGGGAA CGCGGGTCGC AGCGACGATT CCGTTGCCGT AA
 
Protein sequence
MAGEEVQQQI TTAIQTYREE IDRIRRELNE VESLLRQGMA EVDKLSMRET SIANRVRDLD 
VNLERYEKTD IKTFYTTLIE VQMRLQTMRA QVEQLQTRRE TLRDRQSLIG EFVELLEAAA
AQLERSAKIV DLPFDPQTMI ANIIQSQESE RLRISLQMHD GPAQAMSNLV LRAEICQRLL
DRDLDQARAE LVALKNAVNN TLQETRKFIF DLRPMTLDDL GLVPTLRRYV AQISEKHKID
LNLMIQNLDQ RLPGHYEVTI FRFIQEAINN VVRHSGATQA RIMLDNSDNT LHILIEDNGS
GFAVQDAIAS AGTRKNMGLA NMRQQIEVLL QGEFGIESTI GRGTRVAATI PLP