Gene Cagg_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1911 
Symbol 
ID7266402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2342304 
End bp2344532 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content55% 
IMG OID643566748 
ProductUvrD/REP helicase 
Protein accessionYP_002463242 
Protein GI219848809 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.306722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.156803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CCGACCTGCT GGCCAACCTG AACCCACAAC AACAACGCGC CGTAACCACT 
GTTACGGGGC CGGTATTGGT GTTGGCCGGG CCGGGTAGTG GCAAAACGCG CGTTCTCACC
CACCGCATCG CCTACCTGAT TGACGAAGTT GGCGTTGATC CGCTTCAGAT TTTGGCCGTC
ACCTTCACCA ACAAAGCGGC CCGCGAAATG CGCGAGCGCC TGATGGCACT GCTCGGCGAA
GCCATCGCCC ACGACCTGAC CGTCGGGACC TTCCATTCCA TCTGCGCTCG CTGGCTACGC
CGTGATATTG TTCATCTGGG TCGTGAACGC GATTTTGTCA TCTATGACAC CGATGATCAA
GAACGCCTGC TCAAACGGGT ATTGCGAGAG CTAAACCTCA ACGAGAAACA ACATCTACCC
CGTGCCATTC TCAGTGCTAT TTCGCATGCC AAGAACGAGC TTGTTGATCC AGAGGAGTTT
GCCCGCCACG CACGCACCTA TTTCGACGAG ATAGTAGCAC GCTGCTACGC CCGTTATCAA
GCTCTCCTCT ACGAAAGTAA CGCACTCGAC TTTGACGATC TCCTTGGCGA GACGGTGCGT
TTGTTTAGCA ACTATCCGGC GGTATTGGCC GAATATCACC AACGCTACCG CTTTTTGCTG
GTTGATGAAT ATCAAGATAC CAACCGTGCG CAGTATTTGC TGGTACGCGC GTTGGCCGAA
CGCGACCGTA ATCTGTTCGT GGTTGGTGAT GAGGCGCAGA GCATCTATGC GTGGCGCGGG
GCCGATATTC GCAACATTTT GCAATTCGAG CACGATTATC CCGATGCGAC GGTGATCATG
CTCGAACAAA ATTATCGTAG TACGCAGGCA ATCCTCGACG CTGCCCAAGC GCTGATCAAC
GCTAGTCCAC AACGTAAGTA TGCAAAACGG CTCTGGACGA CAAACGGAAC GGGTGATCAG
GTCGTGCTGT ATGAAGCAGC GAATGATGAA GACGAAGCCG CGTTCGCCGT TAGTGAAATA
ATGCGCCTCA TTGCCGAAGG CACAGCGCGG CCCGGTGATT GTGCAATTAT GTACCGAATG
AACGCACAAT CGCGTCTGGT AGAAGAGGCG TTAATCCAGT CACACCTCCC CTATCAAGTA
ATCGGTGGGG TGCGCTTCTA CGAGCGTAAA GAGGTGAAAG ATGTGCTTGC CTACTTACGC
CTGGTCGCGA ATCCCTACGA CAGTGTGAGT CTGCAACGAG TGATCAATTG GCCGGGACGC
GGGATTGGCG AACGCACGGT CAACGAATTA CTTGTGTGGG CAACTCGGCT TGGTGTCCCA
CTGTATCAGG CGCTCAGTGA ACTGGCCGAT GAGACGACCG AATACCCTTT TGCTGCACGC
GCACGAAACG CACTGCTCGA TTTTTACCGG CTCATCGGCG AATTTCACAG CCTTCGCCAA
CGCATGCCGC TTGGTGAACT GATCGATTAC CTGTTGATGC GCATCGAAGC TCAAGCGACA
TTGTATCAAG AGTACGAAGC GGAGGAAGCC GAAGATCGCT GGCGCAACGT GCAAGAGTTG
CGCAACGCAG CGATCAATTA CGCTAATCTA CCGATTGAAC ATCAATTAGC AGCATTTCTC
GAAGATATTG CGTTGGTCGC CGATACCGAC ACGCTCGACC GCAACAATGA TGTGGTGACG
TGCATCACCC TCCATCAGGC CAAAGGTCTT GAGTTTCCGT ATGTCTTTGT GCTTGGGGTA
GAAGAGGGCT TACTTCCGCA CAGTCGGTCT ACCAATGATC GCAACCAACT GGAAGAAGAA
CGACGCTTGC TCTACGTGGG AATGACGCGG GCGCAACGCC GGTTGTATCT CAGCTATGCG
GCCCAACGTG CGATGTTTGG CCGTGTAACG GTTTGTTCCC GTTCTCGCTT TTTGGCCGAT
ATTCCCCCAA CGTCACTCAA ACTCTTGCGC CGCCGTGGCT ATCGTGCTGT GACCGTCTCC
CAGACCACGA TGTTCAACCA ACGCATGTTG ACCCCTGATC ATCACGATAA GCGCACGACA
CCACTGCCCC TACCGCGTCA AGCTGCCTTC GTCCCCGGTC AGCGCGTCTA TCACGCAACC
TTTGGTGAAG GTATTGTCGT CAGTAGTCGC CTGATCGAAG GCGACGAAGA GGTAACCGTT
CGCTTTGCCG ACCGTGAGCG GCGGTTGCTG GCCAGCTTTG CCCGTCTCCA ACCACTCACG
GACGGATAA
 
Protein sequence
MTTTDLLANL NPQQQRAVTT VTGPVLVLAG PGSGKTRVLT HRIAYLIDEV GVDPLQILAV 
TFTNKAAREM RERLMALLGE AIAHDLTVGT FHSICARWLR RDIVHLGRER DFVIYDTDDQ
ERLLKRVLRE LNLNEKQHLP RAILSAISHA KNELVDPEEF ARHARTYFDE IVARCYARYQ
ALLYESNALD FDDLLGETVR LFSNYPAVLA EYHQRYRFLL VDEYQDTNRA QYLLVRALAE
RDRNLFVVGD EAQSIYAWRG ADIRNILQFE HDYPDATVIM LEQNYRSTQA ILDAAQALIN
ASPQRKYAKR LWTTNGTGDQ VVLYEAANDE DEAAFAVSEI MRLIAEGTAR PGDCAIMYRM
NAQSRLVEEA LIQSHLPYQV IGGVRFYERK EVKDVLAYLR LVANPYDSVS LQRVINWPGR
GIGERTVNEL LVWATRLGVP LYQALSELAD ETTEYPFAAR ARNALLDFYR LIGEFHSLRQ
RMPLGELIDY LLMRIEAQAT LYQEYEAEEA EDRWRNVQEL RNAAINYANL PIEHQLAAFL
EDIALVADTD TLDRNNDVVT CITLHQAKGL EFPYVFVLGV EEGLLPHSRS TNDRNQLEEE
RRLLYVGMTR AQRRLYLSYA AQRAMFGRVT VCSRSRFLAD IPPTSLKLLR RRGYRAVTVS
QTTMFNQRML TPDHHDKRTT PLPLPRQAAF VPGQRVYHAT FGEGIVVSSR LIEGDEEVTV
RFADRERRLL ASFARLQPLT DG