| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1906 |
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| Symbol | |
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| ID | 7266397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 2336435 |
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| End bp | 2337160 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643566743 |
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| Product | Ribonuclease H |
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| Protein accession | YP_002463237 |
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| Protein GI | 219848804 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000526772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.35014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACA ACAAACAATA CTATCTCGTG ATACGCGGAC ACCGACCAGG CGTATATCGC
CAATGGCATG GGGAGGAAGG TGCGGCGAAA CAAGTACAAG GTTTTTCCAA CGCGCTCTAT
AAAGGGTTTG CTACCCTTGC TGACGCGAAA GCATGGGTTG CTACGTTGCC GGAATCAGAG
CGATTGTCGG CGGAGGCGTG GTTAGCCGAA CAGCTCGATC ATGAACCGGA AGCGGCGGTA
TCGCCTGATA CTGTGGTCAT GTATACTGAC GGAAGTGCGC TCGGCAATCC GGGTCCGGGT
GGATACGGGG TGGTATTACG CTACAATCAG CATTACAAAG AGCTGTCCGG CGGATTTCGG
CGTACCACCA ACAATCGGAT GGAACTGATG GCGTGTATTG CCGGGCTACG CGCACTCAAA
CGACCGATGC GGGTTGTCAT CTACAGTGAC TCGAAGTATG TGGTGGACGC AGTACAAGAA
GGGTGGGTGC AGCGTTGGCA AGCCAAGAAT TGGATGCGTA CCTCCACCGA ACCGGCGCAG
AATGCCGATC TGTGGGCCGA ACTGGTACAG CTATGTACGA TCCATCAGGT ACAATTCGTG
TGGGTACCGG GCCACAGCGG GGTGCCCGAT AACGAGCGGT GTCATCAGTT AGCTACTGCA
GCAGCCCAAC AGCCCAATCT GCCACCCGAC ATCGGCTTTG AGCAAGCCGA CGAGCAGAAA
CCATAA
|
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| Protein sequence | MSNNKQYYLV IRGHRPGVYR QWHGEEGAAK QVQGFSNALY KGFATLADAK AWVATLPESE
RLSAEAWLAE QLDHEPEAAV SPDTVVMYTD GSALGNPGPG GYGVVLRYNQ HYKELSGGFR
RTTNNRMELM ACIAGLRALK RPMRVVIYSD SKYVVDAVQE GWVQRWQAKN WMRTSTEPAQ
NADLWAELVQ LCTIHQVQFV WVPGHSGVPD NERCHQLATA AAQQPNLPPD IGFEQADEQK
P
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