Gene Cagg_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1817 
Symbol 
ID7267729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2228843 
End bp2229910 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content54% 
IMG OID643566655 
Productglucose-1-phosphate thymidyltransferase 
Protein accessionYP_002463150 
Protein GI219848717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAC TTGTGCTAAG CGGTGGGAAA GGCACCCGAC TACGCCCGAT TACGTATACC 
AGCGCCAAAC AACTTGTACC GGTCGCTAAC AAGCCGGTAC TTTTCCGTGT GATTGAAGCG
ATCCGTGATG CCGGCATTAC CGACATCGGT ATTGTTATCG GTGATACCGG CGACGAGATT
CGGTCGGCGG TCGGCAATGG CCGGCGTTGG GGAGTCAAAA TCACCTACAT CCCACAGGAA
TCACCGCTGG GCCTTGCGCA TGCGGTTAAG ATCAGCCGTG ATTTTCTGGA TACTGATCGG
TTTGTGATGT TTCTGGGTGA TAACTGCATT CAGGGTGGGA TCAGCCCGTT GATCGAACAG
TTTGGTAACA GCAACTACAA CGCGCAAATC GTGTTGAAAA AGGTTAGCGA CCCACGCTCG
TTTGGCGTCG CCGAACTCGA TGACGATGGG CGCATTATCC GGTTAGTCGA GAAACCGCGC
GAACCGAAGT CGGATTTGGC ACTGGTGGGC ATTTACATGT TCGATTACCA CGTCTTCGAG
GCGGTTGAGG CAATTCGCCC CTCGGCGCGG GGCGAACTCG AGATTACCGA CGCCATTCAG
TGGTTGGTCA GCAACGGGTA CAGCGTGTAC CCGTACATTC ACGAGGGATG GTGGATCGAT
ACCGGCAAAA AAGATGACAT GCTCGAAGCC AATCGGCTGG TGCTCGAAGA GATGGAGCCG
GCGGTACACG GGTATGTGGA TCGTGATTCG CAGTTGATCG GCAAAGTTAT TATCGAACCG
GGCGCCGAGA TCATCAACAG TACGATTCGC GGTCCGGCTA TCATCGGTGA ACATACGCGG
ATCGTCAATG CGTATGTAGG GCCGTTTACT TCGATCTACC ACCATTGCCA CATCGAAGAG
TGCGAAATTG AGCATAGCAT TGTGTTAGAG TACTGCACAA TTCGCAACCT TCCCCACCGG
CTCGAAGACA GCTTGATCGG GCGGAACGTC GAAATCAGTC GTAGCCCGTT ACGACCGAAA
GCATACCGAC TGATGTTGGG CGATAACAGT TCGGTGGGAG TACTGTAG
 
Protein sequence
MKGLVLSGGK GTRLRPITYT SAKQLVPVAN KPVLFRVIEA IRDAGITDIG IVIGDTGDEI 
RSAVGNGRRW GVKITYIPQE SPLGLAHAVK ISRDFLDTDR FVMFLGDNCI QGGISPLIEQ
FGNSNYNAQI VLKKVSDPRS FGVAELDDDG RIIRLVEKPR EPKSDLALVG IYMFDYHVFE
AVEAIRPSAR GELEITDAIQ WLVSNGYSVY PYIHEGWWID TGKKDDMLEA NRLVLEEMEP
AVHGYVDRDS QLIGKVIIEP GAEIINSTIR GPAIIGEHTR IVNAYVGPFT SIYHHCHIEE
CEIEHSIVLE YCTIRNLPHR LEDSLIGRNV EISRSPLRPK AYRLMLGDNS SVGVL