Gene Cagg_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1790 
Symbol 
ID7267702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2196810 
End bp2197760 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content57% 
IMG OID643566630 
ProductABC transporter related 
Protein accessionYP_002463125 
Protein GI219848692 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.154782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG CAATTCAGCT CGGTAAGCAA TTTGGTGATT TTGTCGCGGT ACGTGATCTC 
ACGCTCACCG TACAGCCGGG AGAGTTGGTG GCTTTGCTCG GTCCAAATGG GGCCGGTAAG
ACAACTACCG TGCGTATGTT GGCGGCGATC TTGCCGCCGA GTAGCGGTCA AGCCCGGATC
TGCGGTTATG ACGTTGTGCG TGATGCACAA CGAGTGCGTG GTATGGTGGG TCTCCTGACC
GAATATCCCG GTTTGTACGG ACGAATGGCC GCGCTCGAAT ATTTGGCCTT TTTCGGCGCG
CTGCTTGGTC TCGATGCCGT GCAGTGCCGT CAGCGCAGTG AAGCCCTCTT GCGCCAGTTT
GGCCTCTGGG AGGTGCGCGA CCGTAATCTG GAAAGCTTCT CGAAGGGTAT GCGCCAGAAG
ATGGCATTGA TCCGGGCTAT GATTCACGAT CCGCCGGTGC TGTTTCTTGA TGAACCGACG
ACGGCGATGG ATCCGCAGAG TGCGCGCACG GTCCGCGATG CCATCGGCGA GTTACGTGGC
GCGAAACGGA GTATCTTGCT CACCACGCAT AATCTGAGTG AAGCCGAGGA ATTGGCCGAC
CGGATCGCGA TTATTCGCGG TGGTCAGATT GTCGCAGTTG GCCCCTTCGC CGAACTTAGT
CGCCAGTTGT TGGGAGATCC GGCGTTTGAA CTGATCGTAG CCCGGCCTGC CGATCAAGCC
CGCGCATTGG CAGTGGTGCG CGAATTGGTG GCTGCGGAAG TAGTTGGGCA TGACCGAATC
GTGTGGCAAA CTGCCGAACC ACATCTGCTT AATCCGGCGA TCGTGAATCG GTTGATTACG
GCTGGAATTG CGGTCTACAG TCTATCTGAA CAGCCTCGCC GGCTAGAGGA CCTCTATCTA
CGGATTGTGG CCGAAGATGA AGCAGTTCCG GCGCTATCTG CACGGGGATG A
 
Protein sequence
MIEAIQLGKQ FGDFVAVRDL TLTVQPGELV ALLGPNGAGK TTTVRMLAAI LPPSSGQARI 
CGYDVVRDAQ RVRGMVGLLT EYPGLYGRMA ALEYLAFFGA LLGLDAVQCR QRSEALLRQF
GLWEVRDRNL ESFSKGMRQK MALIRAMIHD PPVLFLDEPT TAMDPQSART VRDAIGELRG
AKRSILLTTH NLSEAEELAD RIAIIRGGQI VAVGPFAELS RQLLGDPAFE LIVARPADQA
RALAVVRELV AAEVVGHDRI VWQTAEPHLL NPAIVNRLIT AGIAVYSLSE QPRRLEDLYL
RIVAEDEAVP ALSARG