Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1747 |
Symbol | recA |
ID | 7269453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2135869 |
End bp | 2136924 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643566589 |
Product | recombinase A |
Protein accession | YP_002463084 |
Protein GI | 219848651 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000101073 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTA CCCCGGAAAA AGAAAAGGCA CTCGCGGCGG CGATGGCGCA GATCGATCGC AAATTTGGTA AAGGCTCCAT CATGAAGATG GGGGAGGTTG GGGGTCGGCT GGCTATCGAA GCTATTCCCA CCGGTTCGAT TGCACTGGAC ATTGCGCTTG GCATTGGTGG TGTACCGCGT GGGCGTGTGA TCGAAATCTT TGGCCCCGAG AGCAGCGGCA AAACCACTCT TGCCCAACAC ATCATCGCCG AAGCACAAAA GATGGGCGGA GTAGGTGCCT TCATCGACGC CGAGCATGCC TTTGATCCAG TGTACGCTGC CCGTTGTGGT GTCAACATCA GTGATCTGTT GGTATCACAA CCCGACACCG GCGAACAAGC ACTCGAAATC TGTGAAATGC TGGTTCGCTC GAATGCGGTC GACGTGATCG TGATTGACTC GGTTGCCGCC CTCGTGCCGC GGGCCGAAAT CGAGGGCGAC ATGGGCGACT CGATGCCCGG TATGCAGGCG CGTCTGATGA GTCAAGCCTT GCGTAAGCTC TCCGGTGCCA TCAGTAAAAG TCGTGCCGTC GTCATTTTTA TCAACCAGTT GCGGATGAAG ATCGGTGTCA TGTTCGGTTC ACCGGAAACT ACTACCGGTG GTCAGGCACT GAAGTTTTAC GCATCGGTAC GGCTTGATAT TCGGCGGATT GAAACGCTCA AACAAGGCCA AGAGGCGATC GGCTCACGGG TTCGCGTTAA GGTGATCAAA AACAAAGTCG CTCCTCCCTT CCGGCAGGCC GAATTCGATA TTCTGGCGAA CGAAGGTATC TCGCGCGAGG GTAACATCAT CGATATCGGT ACCGAGTTGG GGATCATCCG CAAGAGTGGC GCATGGTTTT ACCTCGGTGA GGATCGTCTC GGACAGGGGC GCGAAAATGT GCGCGAGTTT CTCAAGAATA ATCCGGCGCT GACGGATGAA ATCGAGCGCC TGATTAAAGC GCAAGCGTTA ACTAATCCAT CCGCAATTGC ACCGAGTGCC GACATTGGCG ATGACGATGG TGTCTTCGAG GAGTAG
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Protein sequence | MAITPEKEKA LAAAMAQIDR KFGKGSIMKM GEVGGRLAIE AIPTGSIALD IALGIGGVPR GRVIEIFGPE SSGKTTLAQH IIAEAQKMGG VGAFIDAEHA FDPVYAARCG VNISDLLVSQ PDTGEQALEI CEMLVRSNAV DVIVIDSVAA LVPRAEIEGD MGDSMPGMQA RLMSQALRKL SGAISKSRAV VIFINQLRMK IGVMFGSPET TTGGQALKFY ASVRLDIRRI ETLKQGQEAI GSRVRVKVIK NKVAPPFRQA EFDILANEGI SREGNIIDIG TELGIIRKSG AWFYLGEDRL GQGRENVREF LKNNPALTDE IERLIKAQAL TNPSAIAPSA DIGDDDGVFE E
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