Gene Cagg_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1723 
Symbol 
ID7269429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2107281 
End bp2108315 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID643566565 
ProductMannose-6-phosphate isomerase 
Protein accessionYP_002463060 
Protein GI219848627 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC TGTACCCTAT TCTATCCGAA CCGCGATTCG TTGAACCACT CTGGGGTGGG 
CAACGGCTGG CCCCGTGGCT GGCATTGCCA CCGCCGCATC CTGAACGGCT CGGTGAGATC
TGGCTGGTCT TCGACAGTAA TCGGGTGACG AATGGTCCCT TCGCCGGGCG GACGATAGCA
GAGGTGGTAC AAACCTACGG CGAGGCTATG GTAGGCACCC GCTCGTTTGC ACGCTACGGA
GCCGATCTGC CACTACTGGC GAAATTTATC GATGCTGCCG ACCGGCTTTC GGTGCAAGTG
CATCCTGATG ATGAATATGC GCATACCTTT GAGGCGCATA CCGGTTTTCA CGGTAAGACT
GAAGCGTGGT ACATTCTGGC GACTGAGCCG GGCGCAACGG TTACGCTTGG TGTCCGCGCA
CCGGTTGCAC GAACTGCGTT GGCGGCGGCA ATTGCCGATG GGACGATAGA AGATCTGTTG
GCTCAGCAGC CGGTGCGCGC CGGTGATCTC GTCTTTGTAC CGGCAGGGAC TATCCATGCG
ATTAATGCTG GAATTATGCT ATTTGAAATC CAGCAGAAAT CTGATCTGAC TTATCGCTTG
TACGACTACA ATCGACGGGA TGCACGCACC GGTCAGCTTC GTGAGTTACA CATTGAGCAG
GCATTGGCGG TTAGCCGACT CGAGCCGGCT TCGGCTTCCT TCTTCCAACC ACTACCGCTC
GACGAACAGC GTGAATTGCT CGTGGCTTGC TCATCGTTTG CGCTTGAACG ATGGCATGTG
CAAGGTTGTC TCAGTGCTAC TACCGATCCC GGCTCGCTCG AGATCTTGAC GGTCATTGAC
GGCACGATGC AACTGGAATG GGGAAGTGAA ACACTAACAC TACAACGCGG TGCAGCCGTT
CTCTTACCGG CTACCCTAGG CGAGTACAGG GTCGCGGCTT CGCAGGGAAT ACTCCTGCGC
TCGTACATCC CCGATCTGCC CACACTCCTT GCCACGGTCG GTAATGATAC CGGTGTTGCT
CCCATTGTGC AATAG
 
Protein sequence
MNRLYPILSE PRFVEPLWGG QRLAPWLALP PPHPERLGEI WLVFDSNRVT NGPFAGRTIA 
EVVQTYGEAM VGTRSFARYG ADLPLLAKFI DAADRLSVQV HPDDEYAHTF EAHTGFHGKT
EAWYILATEP GATVTLGVRA PVARTALAAA IADGTIEDLL AQQPVRAGDL VFVPAGTIHA
INAGIMLFEI QQKSDLTYRL YDYNRRDART GQLRELHIEQ ALAVSRLEPA SASFFQPLPL
DEQRELLVAC SSFALERWHV QGCLSATTDP GSLEILTVID GTMQLEWGSE TLTLQRGAAV
LLPATLGEYR VAASQGILLR SYIPDLPTLL ATVGNDTGVA PIVQ