Gene Cagg_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1713 
Symbol 
ID7269419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2094722 
End bp2095963 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content60% 
IMG OID643566555 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_002463050 
Protein GI219848617 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.583902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAC GGGTGGTAGT GACCGGAATG GGGGCAATCA GCCCACTTGG TCTGAGTGTA 
GCTGAACTCT GGCAAGGGAT CGTCACCGCG CGTAGTGGCG TCGGCCCGAT CACCCTGTTC
GATCCAACCG GGTTTGATAC GACCTTTGCC GCGGAGGTGA AAGGGTTTGA TCCGACCAAC
TATATGGATC GCAAAGAGGC GCGCCGCACC GATCGTTTCG TCCAGTTTGC CGTGGCCGCT
ACCAAAGAGG CGCTGCGCGA CGCCGAGTTA GACATTACCC CGGCCAACCG CGATGAGATC
GGCGTCTTTA TTGCGAGCGG GATCGGTGGG ATTGCAACCC TCTCTGAGCA ATTGGAGGTG
CTCCGTAGTC GCGGGCCGGG CCGGATCAGC CCGTTCCTCA TTCCGGCGAT GATCACCAAC
CTTGCTGCGG GGCAGGTCTC AATTGTCACC GGTGCGCGTG GGCCGAGTTA TTGCGTAACT
TCAGCGTGTG CCAGCTCGGC GCATGCGATT GGCGAAGCTG CCGAGACGAT CCGACGCGGA
TGGGCAAAGG CGATGATCGT CGGGGGGAGC GAAGCGAGTA TTACCCCCAT CGGCGTGGCC
GGTTTCAACG CGATGCGGGC GCTCTCGACC CGTAACGAAG ACTATACCCA CGCTTCACGC
CCCTTTGACG CCGAGCGCGA CGGTTTTGTG ATGGGCGAAG GCGCAGCGGT GCTGATCCTC
GAAGACCTTG AGTTTGCCCT TGCTCGTGGG GCACGGATCT TGGCCGAGAT TGTCGGTTAC
GGGGCAACTT CCGATGCCTA CCACATTTCA AACCTCGCCG AAGACGGTGA AGGAGTAGCG
CGAGCGATCC GGTTGGCGTT GAAACGCGGC GGTATTGCAC CGAGCGAAGT TGACTATATT
AACGCTCACG CAACGTCAAC GCCGGCCGGC GATCCGGTGG AGACAGCGGC GATCAAGCAG
GTGTTCGGCG GACGTGAGCA ATCACCGCCG GTCAGCGCCA GCAAATCGCA ATTCGGGCAT
CTCCTCGGTG CAGCCGGTGC GATTGAGGCG GTGGTAACGG TGTTGGCTAT GCAGCATAAT
CTGTTGCCGG CCACGATCAA TCTCCAGAAC CCCGATCCGG CCTGCGATCT GGATTTTGTG
CCCAATCAGC CACGTCCGGC CCAGATCGAA GTAGCCCTAA GCAATTCATT TGGCTTTGGG
GGGCATAACG TCTGCCTCGC CTTCCGCAAG TATCACGCAT AA
 
Protein sequence
MDRRVVVTGM GAISPLGLSV AELWQGIVTA RSGVGPITLF DPTGFDTTFA AEVKGFDPTN 
YMDRKEARRT DRFVQFAVAA TKEALRDAEL DITPANRDEI GVFIASGIGG IATLSEQLEV
LRSRGPGRIS PFLIPAMITN LAAGQVSIVT GARGPSYCVT SACASSAHAI GEAAETIRRG
WAKAMIVGGS EASITPIGVA GFNAMRALST RNEDYTHASR PFDAERDGFV MGEGAAVLIL
EDLEFALARG ARILAEIVGY GATSDAYHIS NLAEDGEGVA RAIRLALKRG GIAPSEVDYI
NAHATSTPAG DPVETAAIKQ VFGGREQSPP VSASKSQFGH LLGAAGAIEA VVTVLAMQHN
LLPATINLQN PDPACDLDFV PNQPRPAQIE VALSNSFGFG GHNVCLAFRK YHA