Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1703 |
Symbol | |
ID | 7269409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2079740 |
End bp | 2080936 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643566545 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002463040 |
Protein GI | 219848607 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACTG CCGAAGAACA TCTTTGCAAG GCCACCATAC TTCTTCCAGC TTCCAAGGTT GCCTACGGAA ATATCCTGGT ACCATGGATA TGGTACGCTT TGTTATGTCT AAATAACGGT GGTAAAAACA AGGTAAAAAT GCTCAGCCAA CTCTTTGTAA CCATCTGTCT CATCTGCCTA ACAGCGTGTA CTTTCATACC GGCGAGTAAT CCTTCGCCTC AGCCACCGAC ACTCACCATC ACCGGCTGGG CCGGTTATAT GCCGCCCGCA CTACTCGACG CTTTTAAAAA CGAAACCGGT ATTGAAGTTA CATACATTGG CTATGACAAT ACTGAAGAAG CAATTTCTCA GTTGCAACAA GGGGCACAGT ACGATTTATT GATAGTAAGC TATCAGTTCA TCCCCGAATT GATACACAAC GGCACTCTTG CGCCGATTAA TCGAGCAAAT ATTCCCAATA TTCGCAACCT CAGTGCAACC TTTCGCGATT TGGCGTTCGA TCCCGGTGAA CGGTATTCGG TGATTTACCA GTGGGGCATT ACCGGCTTGC TCGTGCGCAC CGATCTGCTC GCCCGCCCAA TCAAGCGTTG GTCTGATCTC TGGAATCCGA CACTTGACGG TAAAATCTTA CTGTGGCCGA TCCCACGTGA TACGATCAAC GTGCTGCTCA AATCGCTCGG CTACTCGATT AACACCACAG ACACTGATCA GCTCGCTACC GCCCTGGCCC GCGCACCCGC ACTGGCGCAA CGAGTTGGTT GGGTAGACAG CGGGGTAGCG ACGGCCACCC AGTACCTTGT ATCCGGTGAA TACGCCGTCG CCCTCGCTTG GGCGTATGAT GCACGCGACG CTCAACAACA GGATGAACGT ATCACGTTTA TCATTCCTGA AGATGGTACC GTCATTTGGC TGGACAGTTT CGTCATTCCT ACGACTAGTA CCCACCCAGA ACTCGCCGAA CAGTTTATCA ATTTTTTCTT ACGACCAGAC ATGAGCGCAC TCGTGACGAA TGAGTTGGTC ATAGCTACGG CAAATGAAGC GTCATGGCCG TTGGTCAAGC CGGAGCTACT GGCTAATACC AGCATCTTCC CAAGCAATGA CATCCTCGAG CGCGCAGAAT TGGAGGTACC ACTTGACCCG GCAACCCAAA AACTTCATCA TGAAATTTGG CGTGTATTCA CCTTGACGAG ATCGTAA
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Protein sequence | MPTAEEHLCK ATILLPASKV AYGNILVPWI WYALLCLNNG GKNKVKMLSQ LFVTICLICL TACTFIPASN PSPQPPTLTI TGWAGYMPPA LLDAFKNETG IEVTYIGYDN TEEAISQLQQ GAQYDLLIVS YQFIPELIHN GTLAPINRAN IPNIRNLSAT FRDLAFDPGE RYSVIYQWGI TGLLVRTDLL ARPIKRWSDL WNPTLDGKIL LWPIPRDTIN VLLKSLGYSI NTTDTDQLAT ALARAPALAQ RVGWVDSGVA TATQYLVSGE YAVALAWAYD ARDAQQQDER ITFIIPEDGT VIWLDSFVIP TTSTHPELAE QFINFFLRPD MSALVTNELV IATANEASWP LVKPELLANT SIFPSNDILE RAELEVPLDP ATQKLHHEIW RVFTLTRS
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