Gene Cagg_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1687 
Symbol 
ID7268989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2059234 
End bp2060235 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content53% 
IMG OID643566529 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463024 
Protein GI219848591 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCT TACCAGAATT GAGCAGTGTG TGGCGTAACT TGTGGCGTGG TCGGGTCAAA 
CAGGCGCAGC GACGAAAGTT GAGCAGGCTG GAAAAGAAAG AGATGGCATG GGGGTTGTTC
TTCATCAGCC CATGGATGAT CGGGTTCTTA CTCTTTTACT TCTTGCCCAT GATAGCTTCG
TTCGGCTTCT CACTCTACGA TTTCAACCCA GCCGTGCCTG ATCAAGCTCG CTTTGTTGGC
TTTGCCAACT GGCAACGGGC CTTATTTCAG GATGAGGAGG TCTGGTTATC GTTAGGGCGG
ACCCTGCACT TCGCTGCTAT TTCCCTACCG ATCTCGCTAC TTTTTGCGCT GTTTCTCGCT
ATCTTGTTGA ATTCAGAACA CGTACTCGGC AAGAGTGTCT ACCGCACCCT ATTTTACATG
CCGACCATGA TCCCGCTGGT CGCGACGGTG TTGATCTGGA ACGGCGTTCT CAACGAGCAG
GCCGGTTGGA TCAACGTGAT CATTGAACGA TTGACCGGTA TCACAGCGAC CGGCACGCAA
GGCTTGCGCT GGCTGGCCGA CCCCAAGCTG GTCTATTACG CTTATACAAT GTTTGGTCTG
TGGGGTGTTG GCAATGCCAT GATCATCTTT CTGGCCGGTC TACAGGGTGT ACCGACTGAA
CTCTACGAAG CAGCTCAGAT CGACGGCGCC AACTGGTTTC ACCGTCTGAT CTTCATTACC
ATTCCGCTCA TCACCCCGGT AATCTTCTAC CAACTCGTGC TGGGAGTGAT CGGCTCGCTG
CAATACTTCC TCGCCCCCTT TGTCCTCAAC GGCGGCACCG GCTTCCCCGA AGGAATGACC
CGTTTCTTCA TGGTCTACTT CTACAAGCAG TCATTTAGCT TCTTTAGTAT GGGCTACGGC
GCAACCCTGG CATGGCTGAT GCTCATCATC GCCATGATTA TTACGGTTGT TCTTTTTGGC
ACCTCTCGAT TCTGGGTCTT CTATGCAGGG GAGGAACGCT AA
 
Protein sequence
MAPLPELSSV WRNLWRGRVK QAQRRKLSRL EKKEMAWGLF FISPWMIGFL LFYFLPMIAS 
FGFSLYDFNP AVPDQARFVG FANWQRALFQ DEEVWLSLGR TLHFAAISLP ISLLFALFLA
ILLNSEHVLG KSVYRTLFYM PTMIPLVATV LIWNGVLNEQ AGWINVIIER LTGITATGTQ
GLRWLADPKL VYYAYTMFGL WGVGNAMIIF LAGLQGVPTE LYEAAQIDGA NWFHRLIFIT
IPLITPVIFY QLVLGVIGSL QYFLAPFVLN GGTGFPEGMT RFFMVYFYKQ SFSFFSMGYG
ATLAWLMLII AMIITVVLFG TSRFWVFYAG EER