Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1613 |
Symbol | |
ID | 7268179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1967134 |
End bp | 1968918 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643566454 |
Product | VanW family protein |
Protein accession | YP_002462950 |
Protein GI | 219848517 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0632012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.156067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGCA TCCTTGAGTG GCTACTGGTA CTGTGTACAT TGGCCGGGCT GGTTGCTGTC ATTGGCTATG GCATGCTCCT GTTCGGCAAT CAAGTATTTG CCGAACGCAT CTATCCCAAC ATTAGCGTGC GCGGGTTACC AATTGGTGGT ATGACACGGG CGGAAGCACG CACGGCCCTC CAACGTCGCT ACGCCGATTT CTTAGCCGCG CCGGTAACGC TCAGCTTCGA TGGGCAACTC TGGCGACCGG CAGCCGAAGA CCTTGGCCTC AGTTTGGCCA TTGATGAGGC ACTCGACACT GCTTTTGCAC TCGGTCATCA GCCCGATTGG GAAGCTAATC TCCGTCTCGC TGCAGCAACG TGGCAACACG GGATTGATTT GCCTTTGCAC CTGCAATTTG ATCAGCGCGT AGCCCAGATC ACGCTGCGTG CTATCGCTGC CGAAATCGAT CGAGCACCTA TCGATGCCAG TGTCGAGCTG CGCAACAATA TTATCATTGT CGGTACTGAA CAGTGGGGTC GCCAAACCCT TATCGATGAA ACTATCGCCG ATATTGCCGC CGCCGTACAG AGTCTCCAGC CCCAAGAAGT ACCGATTCGT ACCAGACAGC TCGAACCACG AGTACGCGAC ACCGATCTTG CACCAACGGT CACCGAGCTT CGTCTCCTAC TTAGTGGCCC GATTTGGCTA GAGGGACGTG GCGGTCAATG CCCAAACGGA TGCCGTTGGG AATGGCCTGT CACCCAGATC GCGACGTGGA TCAAACTACG CAATCTGACG GCCGTCGATG GCCGCCCGGC AGTGGCCGTT ATGGTGGACC AAACGGCGAT CCGCGCAGCA CTCACTCCTA TCGCTACGGC TCTGCGGGAA GAAGGTGGCC TACCGCGAGT TGACTGGAAT AACGGAAATC CACGTATTCG CACCCCCGGC ACACCCGGCC GTGGCCTTGC CGTCGAAGAA GCGCTGGCCC GCATTAATGG CGCCCTCTAC GGCAACGAAC GCACTATCCT CCTCCCCATG CGCGAATTGC CACCACCGGT AAACCCTGAT AACCTTGCTG CACTCGGTTT GAGCGAACCG GTCGGGATCG GGATCAGTTC GTTCCGTGCC TCTGCTGAAT ATCGGATCAC CAACATTCTG GCCGGCGCTC GGCAGATGGA TGGTGTCCTG ATTCCACCCG GTGCCACCTT TTCGTTTAAT ACGACGCTTG GTCCGGTGAC CCCCGAACGT GGCTTTGTAG AAGGTTTGGC GATCGTTGAC AATCGCACCC AGAAAGAGTG GGGTGGTGGC CTTTGCCAGG TAAGTACTAC CGTTTTTCGC GCTGCATTCT TCGCCGGTTT ACCGATCAGC GAGCGTCACG CCCACTCATT CCGCATCAGT TGGTATGAAG AACTTGGTGA ACCACCCGGT CTCGACGCGG CAATCTTCAC CGGTGTGCAT GATCTGCGCT TCGTGAATGA TACTGGCGGC TGGCTTCTCC TCACCAGCAA GGTCGATCTG CGTCGCCAAC AATTAACGAT GATCTTGTAC GGGCCGCCGA GTAACCGCCG GGTTGAATAC TCGTACCGTA TTCTTGAGCG CACACCAGCT CCTACTCAAC CATTGTATAT CGACGATCCT TCCCTCCCAT CTGGCGTTAT CCGCCAAACC GACACAGCCC GCGGTGGTCT GCGGGTCGAG ATCTATCGGA CGGTGTACAC CAATGGCGAA GTCAGCCTAC GAGACACCAT CCCGACCACC TTCCAGCCGT GGCCTAACAT CTTTGTGCGT GGTACCGGTC GGTAA
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Protein sequence | MWRILEWLLV LCTLAGLVAV IGYGMLLFGN QVFAERIYPN ISVRGLPIGG MTRAEARTAL QRRYADFLAA PVTLSFDGQL WRPAAEDLGL SLAIDEALDT AFALGHQPDW EANLRLAAAT WQHGIDLPLH LQFDQRVAQI TLRAIAAEID RAPIDASVEL RNNIIIVGTE QWGRQTLIDE TIADIAAAVQ SLQPQEVPIR TRQLEPRVRD TDLAPTVTEL RLLLSGPIWL EGRGGQCPNG CRWEWPVTQI ATWIKLRNLT AVDGRPAVAV MVDQTAIRAA LTPIATALRE EGGLPRVDWN NGNPRIRTPG TPGRGLAVEE ALARINGALY GNERTILLPM RELPPPVNPD NLAALGLSEP VGIGISSFRA SAEYRITNIL AGARQMDGVL IPPGATFSFN TTLGPVTPER GFVEGLAIVD NRTQKEWGGG LCQVSTTVFR AAFFAGLPIS ERHAHSFRIS WYEELGEPPG LDAAIFTGVH DLRFVNDTGG WLLLTSKVDL RRQQLTMILY GPPSNRRVEY SYRILERTPA PTQPLYIDDP SLPSGVIRQT DTARGGLRVE IYRTVYTNGE VSLRDTIPTT FQPWPNIFVR GTGR
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