Gene Cagg_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1605 
Symbol 
ID7268171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1960657 
End bp1961076 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content51% 
IMG OID643566446 
Producttranscriptional repressor, CopY family 
Protein accessionYP_002462942 
Protein GI219848509 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.809154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.110502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA ATCTGCGCTT TCGCTTTAGC CCCACCAAAG ATGGTCTGGT CAAAGTACTC 
GGCCCACTCG AGACGGAAAT TATGCAAATC CTCTGGCAAG AGGGTTCAAG CACGGTAAAA
AAGGTGCATC GCAAGCTCGC TCAGCAGCGC GATATTGCCT ACACGACCGT TATGACTACC
ATGAGCCGGC TCGCCGAAAA GGGTGTGCTT CATCGTGAGC GCGACGGGCT GGCGTATGTG
TATACCCCGG TCATTAACGA AGATGAGTTC GTCAATCTGG TCGTGCAACA GGTCCTCGAT
GGATTGCTCG ATGACTACAG TGATACCGCA ATTTCGTACA TGGTCGATTA TCTTGCCAAG
AACAACCCCT CTGAATTGCG GCGTCTGCAA CGCGAGATTA CCAAACGCTT GAATCTATGA
 
Protein sequence
MAFNLRFRFS PTKDGLVKVL GPLETEIMQI LWQEGSSTVK KVHRKLAQQR DIAYTTVMTT 
MSRLAEKGVL HRERDGLAYV YTPVINEDEF VNLVVQQVLD GLLDDYSDTA ISYMVDYLAK
NNPSELRRLQ REITKRLNL