Gene Cagg_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1553 
Symbol 
ID7267330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1900080 
End bp1901402 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content55% 
IMG OID643566395 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002462891 
Protein GI219848458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCACA CATTAATGAA CCGCATCCAC GATCGGTCGG TCTGTGTTGG TGTCATCGGT 
TTGGGCTACG TGGGCTTGCC GCTGGCCGAG CGTGCCGGTC GGGTTGGCTT TCGTGTGCTT
GGGTTTGATG TAAGCCCGAT GCGGGTGGAG CAGGTCAATC GCGGTGAGAG CTATATCGGT
GATGTGGCGG GCACGGCGTT GGCCGCGCTA CGCGAGGCAG GCCGGATCGA GGCAACCACG
GATATGCGAC GCATGAGTGA GTGTGATATC CTCGTGATCT GTGTACCGAC GCCGCTCAAT
GCGACCCGCG AACCCGACAT GCGCTATGTA GAAGCGGCAA GCAATGATGT CGCCGCCAGT
ATTCGACCCG GTCAGTTGGT GATTCTCGAG AGTACGACCT ACCCCGGTAC GACCCGTGAA
CTGATCAAGC CTCGGATCGA GCGGAGTGGG TTACGTGTCG GTGAACAGAT CTTTCTGGCC
TTCTCTCCCG AACGGATCGA TCCTGGGCAG ACGAGTAGCA AAGGGTATAG TGTTGAAAAC
ACCCCTAAAG TCGTCGGTGG AATTACCCCA CAATGTACCG AACTGGCCGG GGCCTTCTAC
GGCTACATCA CCAACCGAGT GGTGCCGGTC AGCTCGCCAG ATGTGGCCGA GTTGACCAAA
TTGTTTGAGA ACATCTTTCG GGCGGTCAAT ATTGCCTTAG TCAACGAGTT GGCTCTTCTC
TGTGACCGGA TGGGGATCAA CGTCTGGGAA GTGATCGAGG CGGCAGCTAC GAAGCCTTAC
GGCTTTATGA AGTTTACCCC CGGCCCTGGC CTTGGTGGGC ATTGTATCCC TATCGATCCA
TTCTATCTCA CGTGGAAGGC ACGGTCTTTC GATTTAACCA CTCGGTTTAT CGAGTTGGCC
GGTGAAATCA ACACCCAAAT GCCGCGCCAC GTCCATGATT TGGTGGTACG CACCCTCAAT
CGGGCGCGTA AGCCGCTGAA CGGCAGCACT ATTATCTTGC TAGGTATTGC CTACAAGCCC
GATGTTGACG ATTATCGCGA ATCACCCGCG TTTAAGGTGT ACGATCTGTT AACTGCCGAT
GGCGCGACGG TAATCCCCTG TGATCCCCAC ATTACCGAGT TTGAACTGCA CGACGGTCGC
CGGATGCAGA CCGTTCCGCT TACGGATGAC CTGCTGCGTT CGTGCGATTG TGCCGTGATT
ATTACCAACC ATAATGCATT CGACTACGAA CGGATTGCGA CATTAGCTCC GGCAATCGTT
GACACTCGCA ACGCTACTCG GCATCTGCAA GGCCCACTGC GCGAGAAGAT TACAGTATTG
TAG
 
Protein sequence
MFHTLMNRIH DRSVCVGVIG LGYVGLPLAE RAGRVGFRVL GFDVSPMRVE QVNRGESYIG 
DVAGTALAAL REAGRIEATT DMRRMSECDI LVICVPTPLN ATREPDMRYV EAASNDVAAS
IRPGQLVILE STTYPGTTRE LIKPRIERSG LRVGEQIFLA FSPERIDPGQ TSSKGYSVEN
TPKVVGGITP QCTELAGAFY GYITNRVVPV SSPDVAELTK LFENIFRAVN IALVNELALL
CDRMGINVWE VIEAAATKPY GFMKFTPGPG LGGHCIPIDP FYLTWKARSF DLTTRFIELA
GEINTQMPRH VHDLVVRTLN RARKPLNGST IILLGIAYKP DVDDYRESPA FKVYDLLTAD
GATVIPCDPH ITEFELHDGR RMQTVPLTDD LLRSCDCAVI ITNHNAFDYE RIATLAPAIV
DTRNATRHLQ GPLREKITVL