Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1545 |
Symbol | |
ID | 7267322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1891225 |
End bp | 1892634 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643566387 |
Product | capsular exopolysaccharide family |
Protein accession | YP_002462883 |
Protein GI | 219848450 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGAACTAC GATTGTATCT CCTGTTTGTT TGGCGTTGGG CGTGGTTGAT TGCATTGTTC GCGGTGATCG GCGGTGGCAT CGGCTACGCC TACTCGCAAA CTCAACCACG TCTCTATGCT GCTTCGACCA TGCTGATGGT CAATCAGGAT CAGGGTATTT TTGCCCGTCC GTCGCCCACG TTCGATGATC TGCGTGCTCG TGAGCGCTAT GCGCTAACGG TACGCGAACT GTTACTCGTC CGACCGGTAC TCGAACGAGC TGCTTCGATG GTTGATGGCG TGACGGCAGC TCAACTCGCT GCCCGCACGA GTACGTCTGA TGTTGGTAAG ACCGAGCTGT TTTTACTAAC GGTACGCGAT ACCGATCGGC AGCGAGCGGT GCGGTTGGCC GATGCGATTG TCGCTTCGTT CCAAGCCCTC GAACGTGATT TGCTCGATAA CCCGTATGCC CAAGCCTCGA GCTTGATCAT CGTTGACCCG GCCCATGCCA AGCGCACTCC GGTGAGTCCT GATTATACGC GCAATATTGT GCTTAGTATC TTTATTGCGG TTGTGCTGGC AATTGGGATC GGATTTTTAT ACGACTATTT CAATACCCGT ATCCGCGATG AAGGTGATTT TACGCGCCGG GGTGGTGGCC GTCCGTTAGT CGTTGTTGGT AAGCTGAACG GCGCTACGCC GGCGGCACAA CTCGTCACGC TCCGCGATCC AGCCTCGCTC GATGCCGAGG CGTATCGCAT GATGCGACTG CACCTTGATG CAATCCCCGG CGACGAACGC CCCCAGGTGA TTGCCGTGAT CAGCCCGTCA CCCGGTGAAG GACGAAGCGT GACCGCGGCT AATCTGGCCG TCGCACTCGC GCAAACCGGG CGACGGGTGG TGCTGGTTGA TGCGCATTTG CGCCATCCCA TCCTGCATAC CATCTTCAAC GTCCCACATC AAGGTGGATT ATCCAACCTC CTGAGTACAC CGGTGCAGGC GATCGAGCCA TTCTTGCGCG TGACCGAGCA ACCAAACTTG TATGTATTGA CGGCAGGGAA TGCCGGTGGT TTGCCGGCTC AGTTGCTAGG TGGGCCACAG TTAGAAAAGG TGCTGGCGGT CCTACGGCAA CACGCCGATG TGGTGTTGAT CGATAGTGCA CCTTTACTCA CATTTGCCGA CACCGCCCTT CTGTTGCGCG CCGTCGATAC CACGCTGGCA GTGGTGCGGG TCAAGCAGAC GACTGAAGAA GAACTACGCC ATATGCTTGA TCTCCTGCGC CAGACCGAGA TCGCATGTCT TGGCGTGGTG CTGAACGGTG TTGTCAAACG TCGCCGACGG TTGCAGTTTA CCGGCTTCAG CTCTTCGCCA TTGATCAAAT CGGCGACTAT TGCGAACCGC AGCGAGATAG CGGGCGACAC AGGAGATTGA
|
Protein sequence | MELRLYLLFV WRWAWLIALF AVIGGGIGYA YSQTQPRLYA ASTMLMVNQD QGIFARPSPT FDDLRARERY ALTVRELLLV RPVLERAASM VDGVTAAQLA ARTSTSDVGK TELFLLTVRD TDRQRAVRLA DAIVASFQAL ERDLLDNPYA QASSLIIVDP AHAKRTPVSP DYTRNIVLSI FIAVVLAIGI GFLYDYFNTR IRDEGDFTRR GGGRPLVVVG KLNGATPAAQ LVTLRDPASL DAEAYRMMRL HLDAIPGDER PQVIAVISPS PGEGRSVTAA NLAVALAQTG RRVVLVDAHL RHPILHTIFN VPHQGGLSNL LSTPVQAIEP FLRVTEQPNL YVLTAGNAGG LPAQLLGGPQ LEKVLAVLRQ HADVVLIDSA PLLTFADTAL LLRAVDTTLA VVRVKQTTEE ELRHMLDLLR QTEIACLGVV LNGVVKRRRR LQFTGFSSSP LIKSATIANR SEIAGDTGD
|
| |