Gene Cagg_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1545 
Symbol 
ID7267322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1891225 
End bp1892634 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content57% 
IMG OID643566387 
Productcapsular exopolysaccharide family 
Protein accessionYP_002462883 
Protein GI219848450 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACTAC GATTGTATCT CCTGTTTGTT TGGCGTTGGG CGTGGTTGAT TGCATTGTTC 
GCGGTGATCG GCGGTGGCAT CGGCTACGCC TACTCGCAAA CTCAACCACG TCTCTATGCT
GCTTCGACCA TGCTGATGGT CAATCAGGAT CAGGGTATTT TTGCCCGTCC GTCGCCCACG
TTCGATGATC TGCGTGCTCG TGAGCGCTAT GCGCTAACGG TACGCGAACT GTTACTCGTC
CGACCGGTAC TCGAACGAGC TGCTTCGATG GTTGATGGCG TGACGGCAGC TCAACTCGCT
GCCCGCACGA GTACGTCTGA TGTTGGTAAG ACCGAGCTGT TTTTACTAAC GGTACGCGAT
ACCGATCGGC AGCGAGCGGT GCGGTTGGCC GATGCGATTG TCGCTTCGTT CCAAGCCCTC
GAACGTGATT TGCTCGATAA CCCGTATGCC CAAGCCTCGA GCTTGATCAT CGTTGACCCG
GCCCATGCCA AGCGCACTCC GGTGAGTCCT GATTATACGC GCAATATTGT GCTTAGTATC
TTTATTGCGG TTGTGCTGGC AATTGGGATC GGATTTTTAT ACGACTATTT CAATACCCGT
ATCCGCGATG AAGGTGATTT TACGCGCCGG GGTGGTGGCC GTCCGTTAGT CGTTGTTGGT
AAGCTGAACG GCGCTACGCC GGCGGCACAA CTCGTCACGC TCCGCGATCC AGCCTCGCTC
GATGCCGAGG CGTATCGCAT GATGCGACTG CACCTTGATG CAATCCCCGG CGACGAACGC
CCCCAGGTGA TTGCCGTGAT CAGCCCGTCA CCCGGTGAAG GACGAAGCGT GACCGCGGCT
AATCTGGCCG TCGCACTCGC GCAAACCGGG CGACGGGTGG TGCTGGTTGA TGCGCATTTG
CGCCATCCCA TCCTGCATAC CATCTTCAAC GTCCCACATC AAGGTGGATT ATCCAACCTC
CTGAGTACAC CGGTGCAGGC GATCGAGCCA TTCTTGCGCG TGACCGAGCA ACCAAACTTG
TATGTATTGA CGGCAGGGAA TGCCGGTGGT TTGCCGGCTC AGTTGCTAGG TGGGCCACAG
TTAGAAAAGG TGCTGGCGGT CCTACGGCAA CACGCCGATG TGGTGTTGAT CGATAGTGCA
CCTTTACTCA CATTTGCCGA CACCGCCCTT CTGTTGCGCG CCGTCGATAC CACGCTGGCA
GTGGTGCGGG TCAAGCAGAC GACTGAAGAA GAACTACGCC ATATGCTTGA TCTCCTGCGC
CAGACCGAGA TCGCATGTCT TGGCGTGGTG CTGAACGGTG TTGTCAAACG TCGCCGACGG
TTGCAGTTTA CCGGCTTCAG CTCTTCGCCA TTGATCAAAT CGGCGACTAT TGCGAACCGC
AGCGAGATAG CGGGCGACAC AGGAGATTGA
 
Protein sequence
MELRLYLLFV WRWAWLIALF AVIGGGIGYA YSQTQPRLYA ASTMLMVNQD QGIFARPSPT 
FDDLRARERY ALTVRELLLV RPVLERAASM VDGVTAAQLA ARTSTSDVGK TELFLLTVRD
TDRQRAVRLA DAIVASFQAL ERDLLDNPYA QASSLIIVDP AHAKRTPVSP DYTRNIVLSI
FIAVVLAIGI GFLYDYFNTR IRDEGDFTRR GGGRPLVVVG KLNGATPAAQ LVTLRDPASL
DAEAYRMMRL HLDAIPGDER PQVIAVISPS PGEGRSVTAA NLAVALAQTG RRVVLVDAHL
RHPILHTIFN VPHQGGLSNL LSTPVQAIEP FLRVTEQPNL YVLTAGNAGG LPAQLLGGPQ
LEKVLAVLRQ HADVVLIDSA PLLTFADTAL LLRAVDTTLA VVRVKQTTEE ELRHMLDLLR
QTEIACLGVV LNGVVKRRRR LQFTGFSSSP LIKSATIANR SEIAGDTGD