Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1544 |
Symbol | |
ID | 7267321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1889707 |
End bp | 1891221 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643566386 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002462882 |
Protein GI | 219848449 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGAA TTTGGTTTCT CTTGATTGCA CTAGGTACTT CCATACTGAC CGGTTGCAGT CAGCCGGTGA TCTCTGAGCC TGAGTCGTCT GCAACAACTG TTCCTACTGA AGCAGCGGCA GCACCGGCAC CCACTACTGA ACCGGTGATT GTAAACGGGA CGCTGATGGC TTCCGGTCGG GTTCAGCCGA TGACGGTGCT TGATCTCAGC TTTGTAAACC CGGGTTCGGT GGCAGAGGTG GTTGTGCAAC TCGGTGATCG GGTACAGGCC GGTGATGTGA TGGCGAGTCT CGATGTACGC ACACTCGACT TGACAATTGC CGAGGCACGG GTGGCGTTAG CTGAAGCGCA AGCCAATTAC GAACAGTTGA TTAGTGGGGC AACGCCCGAA CAGATCGAAC AGGCCGAAGT GGAGATTGCT CGGGCGCGCG CACGCCTGGC CGATGGCCGC ACGAATGTGA CCCAGAGCGA TATTGCCGCA GCGCAAGCTG AGCTGCGTGA AGCGAAGGCA GTGCTCGAAC GGCTCAAAAA GGGTATCACA CCGGAAGACA AGGCGCGCCT CGAAGCTGCT GTAGCCGAAG CTCGTGCCCG GTTGCAGACT CGGATCAATA CGCTCGCCGG TGAAAAGACG CAACTTGAAT CGCAGATCGA GCGCTTGGCA AATGAGTTGC GTAACGCCCA AGATGACTAC TCGCGCACGA AGTGGGCGAA CGAACAGATC ATCGCCAGCG GTGGTCAGTT AACGCAGGCC CAGATCGACA ACGAGACTCG ACTGTTGCGG GCCGTGGAAA ATGCTGAGCA TCGGTTGCAA GAGGCTCGCG TAGCGCTGGA AACTGTGCGC CAGAATGAGT TCAGCGAAAT CGCTGCGTAT CAGGCTGAAG TGCAACAATC GGAAGCGCTC TTGGCCGAGG CGTTGCGTCC GGTAACACTC GATCAGATCG CGGCGGCGGA AAAGCGCATC TTGCAAGCCG AGGCGAAACT GGCTCAGTTT ACGATCAATC ATCCCAACGA GGTAGCTGTG TATGAGGCTG AGCTACGCAA GGCCGAGGCT GATTTGGCTC GTCTGACCGC TCCCCCCCCC AGTGCGCAAA TCGCCATCGC GCAAGCACGG ATTGAGCGGG CCGAAATTGA GCTGCGCAAA GCAGAACTCA ACCGTGAACG TTACCAAATT CGTGCCCCAA TCGACGGAAC CGTTGTAGGT GTCTACGCCC AACCGGGTCA GACGGTTGAG GCTAGCCAGC GCGTGATTAC GTTGGCAACC CTCGATCGGT GGCAGATTGT CGTGACCAAT CTGAGTGAGC TACACATCAG TCTGGTCCAA GAGAACGATC CGGTGACCAT AAGCTTTATC GCGTTGCCTG ATGTTCGGTT GAGTGGAAGG GTTAGTTATA TCGAACCGGT TGGTCAAGAG ACCGGAATCG GTACGACGTA TACCGTCCAT ATTATTCCCG ATAGCTGGGA TCAGCGTCTG CGGTGGAATA TGAACGCGCA AGTGACTTTT GCCGCAAGAC CGTAG
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Protein sequence | MSRIWFLLIA LGTSILTGCS QPVISEPESS ATTVPTEAAA APAPTTEPVI VNGTLMASGR VQPMTVLDLS FVNPGSVAEV VVQLGDRVQA GDVMASLDVR TLDLTIAEAR VALAEAQANY EQLISGATPE QIEQAEVEIA RARARLADGR TNVTQSDIAA AQAELREAKA VLERLKKGIT PEDKARLEAA VAEARARLQT RINTLAGEKT QLESQIERLA NELRNAQDDY SRTKWANEQI IASGGQLTQA QIDNETRLLR AVENAEHRLQ EARVALETVR QNEFSEIAAY QAEVQQSEAL LAEALRPVTL DQIAAAEKRI LQAEAKLAQF TINHPNEVAV YEAELRKAEA DLARLTAPPP SAQIAIAQAR IERAEIELRK AELNRERYQI RAPIDGTVVG VYAQPGQTVE ASQRVITLAT LDRWQIVVTN LSELHISLVQ ENDPVTISFI ALPDVRLSGR VSYIEPVGQE TGIGTTYTVH IIPDSWDQRL RWNMNAQVTF AARP
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