Gene Cagg_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1538 
Symbol 
ID7267315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1883238 
End bp1884050 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content57% 
IMG OID643566380 
Productglycosyl transferase family 2 
Protein accessionYP_002462876 
Protein GI219848443 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.730305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAC CACTCTTCAG CATTATTACG ATCACCCTCA ATTGCGCCGC CGATGCCGAA 
CGAACGGCGC GTAGTGTGTT GGCTCAGACG TTTCCCGATG TTGAGTATTT GGTCAAAGAC
GGTTGCTCGA CCGATGGAAC ACCAGAACGG TTGCAGGCGT TGGGGGTACG GGTGATGGTG
TCGCCCGATA GCGGTATCTT CGATGCGATG AACCAGGGTC TGGCCTATGC CCGTGGGCGC
TACGTCTGCT TCCTCAATGC AGGCGATGTG TTTAGTAGCC CTCACGTGTT ACACATTGTG
GCCGATGCAC TAGCCCGTCA TGGTGAACCT GATTTTCTCT ACGGTGATGT ACGCTCGTTG
GTCGACCATC CGTTTCTCGG TACCGGAACT GACGGAAGCG GACGATTGAT CCGTTACCCT
GACCGGCTGA GTCGGTTTTG GTTATACCGC AAAATGATTT GTCACCAAGT CTGGTTTGTG
CGGCGTGAGA TCTATGCGGC GCAACCGTTT GCCACTGATT ACCGCATTCT GGCCGATTAT
GCCTATCTGC TCGATATGGT ATTGCACCGC CGGGTACGCT ACGCCCATAT CGCCCACGAA
CTCGCCATTT TCGACGGTGG CGGGACAAGT ACGCGATCGT CGCCGCGCCG TGATGCCGAG
CGGGCCCGTG CGTTGGCTTC CGTCTATACG CCTTGGGAAC GGTGGCTGTA TGAAGCCGTC
TTTGGGGGAA TGCGATGGCT CAACCGCACA CTCATCTACC CAGTCATACC GTTGCTACCC
GAACGGTTAC GCGCTCGGCT GAGCGGTCTC TGA
 
Protein sequence
MTEPLFSIIT ITLNCAADAE RTARSVLAQT FPDVEYLVKD GCSTDGTPER LQALGVRVMV 
SPDSGIFDAM NQGLAYARGR YVCFLNAGDV FSSPHVLHIV ADALARHGEP DFLYGDVRSL
VDHPFLGTGT DGSGRLIRYP DRLSRFWLYR KMICHQVWFV RREIYAAQPF ATDYRILADY
AYLLDMVLHR RVRYAHIAHE LAIFDGGGTS TRSSPRRDAE RARALASVYT PWERWLYEAV
FGGMRWLNRT LIYPVIPLLP ERLRARLSGL