| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1475 |
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| Symbol | rplA |
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| ID | 7269309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 1810418 |
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| End bp | 1811131 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643566317 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002462816 |
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| Protein GI | 219848383 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0729357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGC ACGGAAAAAA ATATCTCGCT GCACTGGCGA AAGTTGATCG CTCACGCTTC
TATACACCCG CCGAAGCAAT TGCGTTAGTG AAGGAAACTT CCTATACGAA GTTTGACGCC
ACCGTCGAGG CTCATTTGCG TCTTGGTATT GATCCACGCC ACGCCGATCA GAATATCCGC
ACTACCGTTG CCTTGCCGCA CGGTACCGGT AAGACGGTGC GAGTTTTGGT TTTTGCCCAA
GGTGAGGCGT TGCAAACGGC TCTCGATGCC GGTGCTGATT ACGCCGGGAG CGATGATCTG
ATTGCTCGCA TCGACCGTGA GAATTTCTTC GATTTCGATG TGGCGATTGC TACTCCCGAT
ATGATGGGCA AGGTGGGACG TATCGGTCGT AAGTTGGGTC CGCGTGGCTT GATGCCGAAC
CCCAAGAGCG GAACGGTGGT GCAACCGGCT GATCTGGCGC GTACTATCCG TGAAGTGAAA
GGTGGTCGCG TTGAGATCCG TAATGATAAG ACCGGTATTC TTCACGTTGC GATTGGGAAG
GTAAGCTTCA CCTCTCAGCA GTTGAGCGAG AATCTGGCCG CTCTGATGGA GGCGGTGAAA
GCGGCAAAGC CGAGTGGCGC AAAGGGTACC TATATTCGGA GTGTGACGTT GACCAGCACT
ATGGGTCCCG GTGTGCCGGT CGATCTGGTG GCGGTCCAGA ATCTGAAGCT GTAA
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| Protein sequence | MPKHGKKYLA ALAKVDRSRF YTPAEAIALV KETSYTKFDA TVEAHLRLGI DPRHADQNIR
TTVALPHGTG KTVRVLVFAQ GEALQTALDA GADYAGSDDL IARIDRENFF DFDVAIATPD
MMGKVGRIGR KLGPRGLMPN PKSGTVVQPA DLARTIREVK GGRVEIRNDK TGILHVAIGK
VSFTSQQLSE NLAALMEAVK AAKPSGAKGT YIRSVTLTST MGPGVPVDLV AVQNLKL
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