Gene Cagg_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1466 
Symbol 
ID7269298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1799150 
End bp1800826 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content55% 
IMG OID643566307 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_002462807 
Protein GI219848374 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000105508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CGCAGAAGAT AATCTTTTCG ATGTATCGGG TGGGCAAAGT AGTACCGCCC 
AACCGTGAGA TACTCAAAGA CATCAGTCTC TCGTTCTTTT ATGGCGCAAA GATCGGTGTG
ATCGGGGCCA ATGGTTCCGG CAAAAGTTCG CTGTTGCGGA TTATGGCCGG GATTGACCAG
GATTACACCG GTGAGATTAC TCGTGCTCCC GGCTACACGG TGGGTCTGCT CGAACAGGAG
CCGTACCTCG ATACCACCAA GACGGTACGT GAGGTGGTTG AAGAGGGTAT GGCCGAGGTG
GTAGCGCTGC TGCGTCGCTA TGATGAAATT ACCGAGCAAT TTAACCATCC TGATGCCGAC
TACGATGCGT TAATCGCCGA GCAAGCCGAG TTGCAAGAAA AAATTGATCA CGTCGATGGT
TGGAATCTTG ATAGCCGGCT TGAGTTGGCG ATGGATGCGT TGCGCTGTCC TCCGGGCGAT
ACACCGGTAG CGGTGTTGTC GGGTGGTGAG CGGCGGCGGG TGGCGCTGTG CCGCTTGCTG
TTGCAACAAC CGGATATTCT GTTGCTCGAT GAGCCGACCA ACCACCTTGA CGCCGAGTCG
GTGGCGTGGC TGGAACGCCA CTTGCAAGAG TATAAGGGAA CGGTGATTGC GGTCACTCAC
GACCGGCATT TTCTGAACAA CGTTGCCGGC TGGATTCTCG AACTCGAACG TGGGCACGGT
ATTCCGTGGC GTGGCAACTA TTCAAGCTGG CTCGAACAGA AGCAGCAGCG ATTGGCTGCA
ACCGAGAAAG CCGAGACCCA GCGCCAGAAG GCGTTACAGC GTGAGTTGGA ATGGATCAAT
ATGACGCCGA AAGGTCGTCA TGCGAAGTCG AAAGCGCGCA TTGCTGCCTA CGAACGGCTG
CTCGGCGAAA ATCAAGATCA GCGTGACCGC GAGTTGGAGA TCTACATCCC GCCCGGTCCG
CGGCTTGGTG ATCTGGTGAT TCGGGCGACG AATATCAGTA AAGCTTACGG TGATAAGCTG
CTTTACGAAA ATCTTAGCTT TGATGTCCCG CCCGGGGCGA TTGTCGGTAT CGTTGGTCCG
AATGGCGCCG GGAAGACGAC CCTGTTTCGG ATGATTGTTG GCCAAGAGCA GCCTGACAGC
GGGACGCTCG AAATCGGTGC CTCGGTGAAA CTTGGCTACG TTGATCAGAG CCGTGAGGTA
CTCGACCCGA AGCAGACGGT ATGGGAAGCG ATTTCAGAAG GGAACGACCA GATAATCCTC
GGTGGGCGGC AGGTGAATTC TCGCGCCTAT TGCGCGCGCT TTAACTTTAG TGGTAGCGAT
CAGCAGAAGT TGGTTGGTAG TCTTTCTGGT GGTGAGCGTA ATCGGGTACA TCTCGCGCGC
ATTCTGAAGT CGGGAGCGAA TGTGCTGTTG CTCGATGAGC CGACCAACGA TCTCGATGTG
CATACCCTGC GTGCATTGGA GGAAGGTCTC GAAAACTTTG CCGGTTGTGC GCTGATCATC
TCGCACGACC GCTGGTTCCT CGACCGCGTG GCAACTCATA TCCTCGCCTT TGAGGGTGAT
AGCCAGGTTG TTTGGTTCTC CGGTACCTAT TCGGAATACG TTGTCGATTA CCGCCGTCGT
AAAGGTGCTG CGGCCGATCA TCCGCACCGG ATTGTGTATC GTAAGTTGAC ACGGTAG
 
Protein sequence
MTDTQKIIFS MYRVGKVVPP NREILKDISL SFFYGAKIGV IGANGSGKSS LLRIMAGIDQ 
DYTGEITRAP GYTVGLLEQE PYLDTTKTVR EVVEEGMAEV VALLRRYDEI TEQFNHPDAD
YDALIAEQAE LQEKIDHVDG WNLDSRLELA MDALRCPPGD TPVAVLSGGE RRRVALCRLL
LQQPDILLLD EPTNHLDAES VAWLERHLQE YKGTVIAVTH DRHFLNNVAG WILELERGHG
IPWRGNYSSW LEQKQQRLAA TEKAETQRQK ALQRELEWIN MTPKGRHAKS KARIAAYERL
LGENQDQRDR ELEIYIPPGP RLGDLVIRAT NISKAYGDKL LYENLSFDVP PGAIVGIVGP
NGAGKTTLFR MIVGQEQPDS GTLEIGASVK LGYVDQSREV LDPKQTVWEA ISEGNDQIIL
GGRQVNSRAY CARFNFSGSD QQKLVGSLSG GERNRVHLAR ILKSGANVLL LDEPTNDLDV
HTLRALEEGL ENFAGCALII SHDRWFLDRV ATHILAFEGD SQVVWFSGTY SEYVVDYRRR
KGAAADHPHR IVYRKLTR