Gene Cagg_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1458 
SymbolgatA 
ID7269290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1790948 
End bp1792414 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content59% 
IMG OID643566300 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_002462800 
Protein GI219848367 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT TACATTATCT TACCGTTAGC GCCGCCCACA CAGCACTTGC TGCCGGCGAA 
CTCACCGCCG TTGAACTTAC CGAGGCATGT CTGGCACGAA TCAACGCCAC CGAACCGCAG
ATTCGCGCCT TCCTACATCT CACACCTGAA GCCGCATTGG CTGCCGCACG AGCTGCCGAC
GAGCGTCGCC GACGCGGACA AGCGCTAAGC CCACTAGATG GCATTCCCAT CGGCATCAAG
GATGTGATTT GCACCAACGG CGTACCGACG ACTGCCGGCT CCCGGATATT AGCCGGCTTC
CGCCCACCCT ACAACGCCAC CGTCATCGAG CGTTTACTGG CTGCCGGCAC CGTCTTGATC
GGCAAACTCA ACTGCGACGA GTTTGCGATG GGTTCGAGCA CCGAGAACAG CGCCTACCAG
ATCACCACGA ACCCGTGGGA CACCAGCCGT GTACCGGGAG GTAGTAGTGG TGGTAGTGCT
GCGGCTGTTG CCGCCGGTCA AGTACCGGCT ACGCTTGGCA CCGATACCGG AGGCTCGATC
CGCCAGCCGG CTGCACTCTG CGGCATTAGC GGTCTCAAAC CGACCTACGG ACGGGTTAGC
CGCTATGGCC TGATTGCCTA CGGCTCCTCA CTTGATCAGA TCGGGCCAAT GGCATGGACG
GTCGCCGATC TAGCTTTGAT CATGAACGTC ATTGCCGGGC ACGATCCGCG TGATGGTACG
AGTGCTCCCC TTCCCACCCC CGACTACACA GCCGCCCTTA CAGGTGATAT ACGCGGGTTA
CGAATTGGTA TTCCCCGGGA GTACTTCGTG GAAGGGATGG AACCGGGTGT AGAAGCTGCA
ACCCGCACCG CGATTGAGGT GCTTCGGGAG CAAGGTGCGA CGCTGGTAGA AGTCTCACTG
CCACACACCA AATATGCTTT GCCTACATAC TACATCATCG CGCCCGCCGA GGCCAGTGCA
AATTTGGCCC GTTTCGACGG TGTGCGCTAC GGCTTCCGCG CCGAAGGTGA AACGATGTGG
GAACAGATCG AGCAGACGCG CGGTCAAGGA TTTGGGCCGG AAGTACGGCG CCGGATTATG
TTAGGAACGT ATGCCCTCTC GGCCGGGTAC TACGATGCGT ATTACCGGCG TGCGCAGCAG
GTGCGCACGT TAATCAAGCG CGACTTCGAC CAGGTCTTCA ATGAGGTCGA TCTCCTCGCT
ACACCAACTT CACCGACCGT CGCCTTCCCC ATCGGCCAAA AGATCAACGA TCCACTGGCG
ATGTATCTGA GTGATGTCTG CACGCTACCG ATCAATCTGG CCGGAGTTCC CGCGCTGGTG
GTACCGTGTG GCTTCAGTGA CGGTTTACCG GTTGGTCTCC AACTGATTGG TCGCCCATTT
GATGAAGCAA CGTTGCTGCG TGTCGGTGAT GCGTATCAGC GTGTGACCGA TTGGCATACG
CGCCGACCAG ATCTCGCCCG GGCATAA
 
Protein sequence
MTELHYLTVS AAHTALAAGE LTAVELTEAC LARINATEPQ IRAFLHLTPE AALAAARAAD 
ERRRRGQALS PLDGIPIGIK DVICTNGVPT TAGSRILAGF RPPYNATVIE RLLAAGTVLI
GKLNCDEFAM GSSTENSAYQ ITTNPWDTSR VPGGSSGGSA AAVAAGQVPA TLGTDTGGSI
RQPAALCGIS GLKPTYGRVS RYGLIAYGSS LDQIGPMAWT VADLALIMNV IAGHDPRDGT
SAPLPTPDYT AALTGDIRGL RIGIPREYFV EGMEPGVEAA TRTAIEVLRE QGATLVEVSL
PHTKYALPTY YIIAPAEASA NLARFDGVRY GFRAEGETMW EQIEQTRGQG FGPEVRRRIM
LGTYALSAGY YDAYYRRAQQ VRTLIKRDFD QVFNEVDLLA TPTSPTVAFP IGQKINDPLA
MYLSDVCTLP INLAGVPALV VPCGFSDGLP VGLQLIGRPF DEATLLRVGD AYQRVTDWHT
RRPDLARA