Gene Cagg_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1451 
Symbol 
ID7269283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1780379 
End bp1781998 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content56% 
IMG OID643566294 
Productglycyl-tRNA synthetase 
Protein accessionYP_002462794 
Protein GI219848361 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.269775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCTA CCTCTCTTGA CCAGATCGTG GCGCTGGCAA AGCGTCGCGG CTTTATCTTT 
CCCAGCAGCG AGATCTATGG CGGTTTACAG GGCGTGTATG ACTACGGCCC CCTCGGCGTC
GAATTGAAGA ATAACATCAT TGCCGATTGG TGGCGGACGA ATGTGTATGA ACGTGACGAT
ATGGAGGGTC TCGATGCGGC AATCTTGATG AACCGGCTGG TCTGGAAATA TTCCGGTCAC
GAAGAGACCT TCAACGATCC CTTGGTCGAT TGCCGCACCT GCAAGATGCG CTGGCGCGCC
GACCATATTC ACGGCGTGTG TCCTAATTGT GGTTCGCGTG ACCTCACCGA GCCGCGCCCG
TTTAATATGA TGTTCCGTAC CCAGATCGGG CCGGTGGCTG ATAGCAGCTC GTTTGCCTAC
TTGCGCCCCG AAACGGCACA AGGCATTTTC GTCAATTTTG CCAATGTTCT CGCTACCACT
GCCCGAAAAT TGCCGTTTGG GATTGCCCAA GTCGGCAAGG CGTTTCGCAA CGAGATTACC
CCACGCAATT TTATCTTCCG GGTGCGTGAA TTCGAGCAGA TGGAGATTGA GTATTTTGTC
ATGCCGGGTA CCGATGAAGA GTGGCATCAG CGGTGGCTTG AGGCCCGATT GGCGTGGTGG
GAGCAGATCG GTATTCCGCG GAGCCGGATT ACAATCTACG ACGTGCCACC CGATGAGCTT
GCCCATTACT CAAAACGCAC GTTCGACCTT ATGTACGATT ACCCCAACAT CGGCGTGCAA
GAGATCGAGG GCATCGCTAA CCGTACCGAT TACGATCTCG GTTCACACAG CAAAGATCAA
GATCAACTCA ATCTCACCGC CCGGGTGAAC CGCAATGAAG ATAGCCTCGC CCGCCTTACC
TATTTCGATC AGGCGAGCGG TCGCCATGTG GTGCCGTATG TGATCGAGCC ATCAGCCGGG
GTAGGACGTT GTATGCTGGC GGTCATGTGC GAAGGGTATG CGGAAGAATT GACCAAGCCG
ATCCCGACCG AGAAGTTGAC TGCTGTCGGT GATGCCTTAC AGACGTTCCT CAAATCGGTT
GGGCGTAGCG AGAAGATCGG TGGTGAAGCC CGCGATGCCA TCCTTGCTCG TGGCGAAGCG
TTACAACAGG CGCTTACCGA ACGGTTACCT GAAGTGGAGC AGTTGTTGGC GATGCCCGGC
GCCGATCAGA TCGAGGTCGG GAAGAAGCTG CGTGGGCAAG TACAACCGCT GATCGATGAA
CATTACCGAA CCGTGTTGCG CCTCAAACCG CGCCTTGCCC CGATTAAGGC CGCCGTCTTC
CCTCTCAAAC GCAACCACGA ACAGCTTGTC ACTACGGCCA AAGCGGTGCG ACGCCAGTTG
CAGGTCGGTG GCGAGATGCG CACCGTTTAT GACGATACCG GCGCGATTGG CAAGCTCTAC
CGTCGTCAAG ATGAGATCGG AACCCCCTTC TGCATTACGG TTGACTTCGA TACGATTGGT
CAGGGCAAAG ACCCATCGCT GGCGGGAACG GTAACGGTGC GCGATCGCGA TACGATGGCG
CAGGAGCGAG TACCGATTAG CGAATTAGAA GGATACCTAC GGGAGAAACT TCGCGCGTAG
 
Protein sequence
MPATSLDQIV ALAKRRGFIF PSSEIYGGLQ GVYDYGPLGV ELKNNIIADW WRTNVYERDD 
MEGLDAAILM NRLVWKYSGH EETFNDPLVD CRTCKMRWRA DHIHGVCPNC GSRDLTEPRP
FNMMFRTQIG PVADSSSFAY LRPETAQGIF VNFANVLATT ARKLPFGIAQ VGKAFRNEIT
PRNFIFRVRE FEQMEIEYFV MPGTDEEWHQ RWLEARLAWW EQIGIPRSRI TIYDVPPDEL
AHYSKRTFDL MYDYPNIGVQ EIEGIANRTD YDLGSHSKDQ DQLNLTARVN RNEDSLARLT
YFDQASGRHV VPYVIEPSAG VGRCMLAVMC EGYAEELTKP IPTEKLTAVG DALQTFLKSV
GRSEKIGGEA RDAILARGEA LQQALTERLP EVEQLLAMPG ADQIEVGKKL RGQVQPLIDE
HYRTVLRLKP RLAPIKAAVF PLKRNHEQLV TTAKAVRRQL QVGGEMRTVY DDTGAIGKLY
RRQDEIGTPF CITVDFDTIG QGKDPSLAGT VTVRDRDTMA QERVPISELE GYLREKLRA