Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1403 |
Symbol | |
ID | 7267255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1728620 |
End bp | 1729636 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643566246 |
Product | protein of unknown function UPF0052 and CofD |
Protein accession | YP_002462746 |
Protein GI | 219848313 |
COG category | [S] Function unknown |
COG ID | [COG0391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0067064 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATC TCCCCTCACT ACGACTGGTT GCCCTCGGTG GCGGTGGCGG TAGTGCCCAG ACCCTTCTCG GTGCTCGCCC GTTCTTCGCC GAACGTACTG CGATCATTGC CGTAACCGAT TCAGGTCGCA GTACGGGTAT AGCACGTCAG ATCGCCGATA TTCCGGCCCC CGGTGATCTG CGCAACGTAC TGGCTACATT GGCGGCTGCA CCAAACCAAA CGCTCGCCCG CTTAATGCAA TACCGACTTA AAAGCCCGTC CTTTCCCTTC CTGGATGGAA TGGCAATAGG GAATCTCATG TTGGGCGGAC TCGTACAGAT GGAAGGAGAC ATCGCCGCCG CCGCAGCGAC TGCGCGCGAG CTGTTGGGTT GCCCAGAACA CATTTTGCCC GTTTCGACGG CCAATACCCG TTTGTGTGCC GAGCTGGCCG ACGGACGCAT TGTCGTCGAG GAGGTTGCCG TGCGGACACC TGGCAAGCCA CCGATTCGCC GCCTCTTTCT CGACCCACCG GCAGCCGCTT ACCCCCCTGC GCTTACCGCA TTGGCAACCG CCGATCTGAT CGTGATCGGC CCCGGTAGCT TCTATACATC ACTTCTGGCA ACACTCTGCT TTGATGGTAT CGTCGAAACC CTGCGCACCA CACCGGCAAC CATCGTATTT GTTTGCAACA CAACAACTCA GCCCGGTCAG ACCGATGGTA TGACAATAGC CGACCACGTG GCCCGCCTTG TCGAAGTTCT CGGCCCTGGT GTGCTTGACG TGGCGTTGAT TAACGATGCG AACGCTCTCC ATCCGGCAAT TGTCGCTCGC TATCAAGCTG CGGGCCTGCA TCCACTCTCG CTGACCGATA CCGACCGACA GGCGATTCGT GCCCTCGGCG TCGAGCCGCT CGTGCGCGAT TTAGCCGAAC CTGATCCCGG CCACCGTGAA CTGTGGCAAA AAGCCGATAC CATCCGTCAC GATCCACAAA CGCTTGGCTT GGCCCTGTGG AAGCTGGCGC TTGATCGGAT GCAATAA
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Protein sequence | MTNLPSLRLV ALGGGGGSAQ TLLGARPFFA ERTAIIAVTD SGRSTGIARQ IADIPAPGDL RNVLATLAAA PNQTLARLMQ YRLKSPSFPF LDGMAIGNLM LGGLVQMEGD IAAAAATARE LLGCPEHILP VSTANTRLCA ELADGRIVVE EVAVRTPGKP PIRRLFLDPP AAAYPPALTA LATADLIVIG PGSFYTSLLA TLCFDGIVET LRTTPATIVF VCNTTTQPGQ TDGMTIADHV ARLVEVLGPG VLDVALINDA NALHPAIVAR YQAAGLHPLS LTDTDRQAIR ALGVEPLVRD LAEPDPGHRE LWQKADTIRH DPQTLGLALW KLALDRMQ
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