Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1375 |
Symbol | |
ID | 7268667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1700971 |
End bp | 1703151 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643566218 |
Product | hypothetical protein |
Protein accession | YP_002462718 |
Protein GI | 219848285 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.972506 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACAGA GAACATCAGA AACAGCAAAA CAGCAGCAGA TAATCGAAGC CGTTCTGGAT GTGTTGCAGA AAGTAGCCGG CGATGTGGTA GGCCTATCTA TCCGTGATTT GCAGCTCCAA TTGCGCGCAC TGGATCTAAT CGTCGCAGAT CACTTGTTAA GAAGCGCCTT GAACCAATTG CTGGACGAAG GCAAGATAGA GAAGCGACCT TGGCCGGAGC ACAGAGGAAA CTTCTGTTTC AATCTACCCG GCCAGGGTAT CTCTCAAATG TCCCTGTTTG ACCTACAGAC CAGTCGTGAC GAGATCGAGC GAGAAGAGCG AAACGGCCTA GATCTGTGGC AACGGGATGA GGCCGAGCGT GAACGTGCAA CCGCTTCGGT CATGGAAGAG ATCGCCCGCA GCCACGCCCT TGAGGAAAAC TACGCCAAGT TGGTTCATGA TATTGCTTCC GTCCTTGCCG ATGAGAACCC GGTTGACCTT ATTCTGGAGA TCGCCGATTG GGTGATCAAA GACTTGAACG ATTTGGCGGA AAAGATAGGA GCGGCAGGTT CGGGCGCGCA GAGCGAAATT CAGCGGTTAA CCAGAGAACT CGGGTTTCGG CGGTCAAAAG CAGAGAGTTT TTTCCAGAGG CTTTGGAGGC TGGACCGCTC GATAGGAAGT GCAAAAGGAA TTCTTGATAT TCCAACCGTG CCACAAATGC TCAGGGGTAG CAAGATAAGA TTTGATAAAG AGGCTGCTAA ACGCCGTCTC CAAGAGAGAA TAGTCGGAAA CAAGGTCATA GAAGTCATAA CGGCGCCTGA AAATCCTCAC AAAGCAGCAG TCGGGACGGA TGCTTCGGTA GGAGATGTGA TGATAGAACA TGCACGTGGG AGTTTTATCC CGCCAACCCC GGCCACCCTG TTTGTCTCCG CCGGGGCAAT GAGAGTGCTT GATCGGTCGA ATGCCCTTAG CTATTGGGAC TACGACTTAG ATCCGCGCGA ACTCCGGCGA TACAAAGATT TGGATGCAGC CGTAGAGGGA CTGTTGATCT CGCCACACTT GCGTCGAGAA GTTATCACGG ACTTTCGCCA TTTGCGTTCT GCCGCCATGG AATTGCGTCA ATACGCCGAG GAACTACGAA TCGTTCTACA ACAATCCAAA TGGCATCCTA TCAGTGGAGT ACCCGAAATA CAACACCCAC CGACAGTCAC ATTACTGATC CGCGATGGCC GCATTTTTCC ATTGGTGCAT CGTTTGGATG ACTATGACGG AGCCAGCGCC CCGGATGACA TTTTATACGG CGAAGTCGTC CGGCGGGAAA TCCGGACTTT CCAAAAGGTT TTTCATAACA CGGCAGGTAA CGGATGCTTG GGTGCAATTT ACGGTGGCGC GGTAAAGTCT CCCGAATATT CTTGGCTGGC AATGATTACT TTCTGGTACT TACATGTCAA GAAAGGCCAT CCGGATTTGG TCGATGCTTT CTACCGCCCG CCGTTGAACG ACCAAGCCGT TACCCATCTT TTGTTCTGGG GACTGGCCGA GTCGAAACCG GATCAGGCTT TTGGCGACCC ACGGAACTCG TTCGTAACGT TCCGAGCTCT CAGACGCTTT TCCGACATAG CTTTCTTCCC TCATCCCAGG CCGCTTACCG ATGATTCGGG TAAGGTTGTC CGGACGGTTC AAGAAGACAA CATAGACGAT TGGCTTGCTT ACATTCAGCA ACATATCAAC GAGGCGAACC AGAGATATGA CCAGCATAAG CGGGGAATTC CGGCGTTGAC CACGATTGAT GACTATAAGC CTTTCCTTGA CCTCTGCCAT CGCGCCGGGG TCGCGATGTT TTATGCCGCT CCTGCCAGAA TGTATAGGGC TACGTTGAGC GATCGGGCGC ACTTCTTCAC ACCACGCTGG GAAATAGCAG TTGATCTAAC AAAGGATATA GGAGAGGAGA TCAAACGCCG TCTTGAAGGG CTTATGGCGT GGCTGGTTGA GCAAGACGGA CTGGTAGCCG ATGAGTCTCA TGCCGTGGGA GGATTTGAAG AAGTGGCCGA AGGCCTTCCG CTTTTTATTC CCAACGTTGT GATGGAAGCC CACCGAGCAG TTGGATACGG CCGCGAACGA CATGCGATGG ATGTACAAGA CGATCTCCAA AGGCTGGTTA CCGATATTCG TGCCGGACGA TTGGGTTCTG TAAATCTATG A
|
Protein sequence | MAQRTSETAK QQQIIEAVLD VLQKVAGDVV GLSIRDLQLQ LRALDLIVAD HLLRSALNQL LDEGKIEKRP WPEHRGNFCF NLPGQGISQM SLFDLQTSRD EIEREERNGL DLWQRDEAER ERATASVMEE IARSHALEEN YAKLVHDIAS VLADENPVDL ILEIADWVIK DLNDLAEKIG AAGSGAQSEI QRLTRELGFR RSKAESFFQR LWRLDRSIGS AKGILDIPTV PQMLRGSKIR FDKEAAKRRL QERIVGNKVI EVITAPENPH KAAVGTDASV GDVMIEHARG SFIPPTPATL FVSAGAMRVL DRSNALSYWD YDLDPRELRR YKDLDAAVEG LLISPHLRRE VITDFRHLRS AAMELRQYAE ELRIVLQQSK WHPISGVPEI QHPPTVTLLI RDGRIFPLVH RLDDYDGASA PDDILYGEVV RREIRTFQKV FHNTAGNGCL GAIYGGAVKS PEYSWLAMIT FWYLHVKKGH PDLVDAFYRP PLNDQAVTHL LFWGLAESKP DQAFGDPRNS FVTFRALRRF SDIAFFPHPR PLTDDSGKVV RTVQEDNIDD WLAYIQQHIN EANQRYDQHK RGIPALTTID DYKPFLDLCH RAGVAMFYAA PARMYRATLS DRAHFFTPRW EIAVDLTKDI GEEIKRRLEG LMAWLVEQDG LVADESHAVG GFEEVAEGLP LFIPNVVMEA HRAVGYGRER HAMDVQDDLQ RLVTDIRAGR LGSVNL
|
| |