Gene Cagg_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1375 
Symbol 
ID7268667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1700971 
End bp1703151 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content52% 
IMG OID643566218 
Producthypothetical protein 
Protein accessionYP_002462718 
Protein GI219848285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.972506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA GAACATCAGA AACAGCAAAA CAGCAGCAGA TAATCGAAGC CGTTCTGGAT 
GTGTTGCAGA AAGTAGCCGG CGATGTGGTA GGCCTATCTA TCCGTGATTT GCAGCTCCAA
TTGCGCGCAC TGGATCTAAT CGTCGCAGAT CACTTGTTAA GAAGCGCCTT GAACCAATTG
CTGGACGAAG GCAAGATAGA GAAGCGACCT TGGCCGGAGC ACAGAGGAAA CTTCTGTTTC
AATCTACCCG GCCAGGGTAT CTCTCAAATG TCCCTGTTTG ACCTACAGAC CAGTCGTGAC
GAGATCGAGC GAGAAGAGCG AAACGGCCTA GATCTGTGGC AACGGGATGA GGCCGAGCGT
GAACGTGCAA CCGCTTCGGT CATGGAAGAG ATCGCCCGCA GCCACGCCCT TGAGGAAAAC
TACGCCAAGT TGGTTCATGA TATTGCTTCC GTCCTTGCCG ATGAGAACCC GGTTGACCTT
ATTCTGGAGA TCGCCGATTG GGTGATCAAA GACTTGAACG ATTTGGCGGA AAAGATAGGA
GCGGCAGGTT CGGGCGCGCA GAGCGAAATT CAGCGGTTAA CCAGAGAACT CGGGTTTCGG
CGGTCAAAAG CAGAGAGTTT TTTCCAGAGG CTTTGGAGGC TGGACCGCTC GATAGGAAGT
GCAAAAGGAA TTCTTGATAT TCCAACCGTG CCACAAATGC TCAGGGGTAG CAAGATAAGA
TTTGATAAAG AGGCTGCTAA ACGCCGTCTC CAAGAGAGAA TAGTCGGAAA CAAGGTCATA
GAAGTCATAA CGGCGCCTGA AAATCCTCAC AAAGCAGCAG TCGGGACGGA TGCTTCGGTA
GGAGATGTGA TGATAGAACA TGCACGTGGG AGTTTTATCC CGCCAACCCC GGCCACCCTG
TTTGTCTCCG CCGGGGCAAT GAGAGTGCTT GATCGGTCGA ATGCCCTTAG CTATTGGGAC
TACGACTTAG ATCCGCGCGA ACTCCGGCGA TACAAAGATT TGGATGCAGC CGTAGAGGGA
CTGTTGATCT CGCCACACTT GCGTCGAGAA GTTATCACGG ACTTTCGCCA TTTGCGTTCT
GCCGCCATGG AATTGCGTCA ATACGCCGAG GAACTACGAA TCGTTCTACA ACAATCCAAA
TGGCATCCTA TCAGTGGAGT ACCCGAAATA CAACACCCAC CGACAGTCAC ATTACTGATC
CGCGATGGCC GCATTTTTCC ATTGGTGCAT CGTTTGGATG ACTATGACGG AGCCAGCGCC
CCGGATGACA TTTTATACGG CGAAGTCGTC CGGCGGGAAA TCCGGACTTT CCAAAAGGTT
TTTCATAACA CGGCAGGTAA CGGATGCTTG GGTGCAATTT ACGGTGGCGC GGTAAAGTCT
CCCGAATATT CTTGGCTGGC AATGATTACT TTCTGGTACT TACATGTCAA GAAAGGCCAT
CCGGATTTGG TCGATGCTTT CTACCGCCCG CCGTTGAACG ACCAAGCCGT TACCCATCTT
TTGTTCTGGG GACTGGCCGA GTCGAAACCG GATCAGGCTT TTGGCGACCC ACGGAACTCG
TTCGTAACGT TCCGAGCTCT CAGACGCTTT TCCGACATAG CTTTCTTCCC TCATCCCAGG
CCGCTTACCG ATGATTCGGG TAAGGTTGTC CGGACGGTTC AAGAAGACAA CATAGACGAT
TGGCTTGCTT ACATTCAGCA ACATATCAAC GAGGCGAACC AGAGATATGA CCAGCATAAG
CGGGGAATTC CGGCGTTGAC CACGATTGAT GACTATAAGC CTTTCCTTGA CCTCTGCCAT
CGCGCCGGGG TCGCGATGTT TTATGCCGCT CCTGCCAGAA TGTATAGGGC TACGTTGAGC
GATCGGGCGC ACTTCTTCAC ACCACGCTGG GAAATAGCAG TTGATCTAAC AAAGGATATA
GGAGAGGAGA TCAAACGCCG TCTTGAAGGG CTTATGGCGT GGCTGGTTGA GCAAGACGGA
CTGGTAGCCG ATGAGTCTCA TGCCGTGGGA GGATTTGAAG AAGTGGCCGA AGGCCTTCCG
CTTTTTATTC CCAACGTTGT GATGGAAGCC CACCGAGCAG TTGGATACGG CCGCGAACGA
CATGCGATGG ATGTACAAGA CGATCTCCAA AGGCTGGTTA CCGATATTCG TGCCGGACGA
TTGGGTTCTG TAAATCTATG A
 
Protein sequence
MAQRTSETAK QQQIIEAVLD VLQKVAGDVV GLSIRDLQLQ LRALDLIVAD HLLRSALNQL 
LDEGKIEKRP WPEHRGNFCF NLPGQGISQM SLFDLQTSRD EIEREERNGL DLWQRDEAER
ERATASVMEE IARSHALEEN YAKLVHDIAS VLADENPVDL ILEIADWVIK DLNDLAEKIG
AAGSGAQSEI QRLTRELGFR RSKAESFFQR LWRLDRSIGS AKGILDIPTV PQMLRGSKIR
FDKEAAKRRL QERIVGNKVI EVITAPENPH KAAVGTDASV GDVMIEHARG SFIPPTPATL
FVSAGAMRVL DRSNALSYWD YDLDPRELRR YKDLDAAVEG LLISPHLRRE VITDFRHLRS
AAMELRQYAE ELRIVLQQSK WHPISGVPEI QHPPTVTLLI RDGRIFPLVH RLDDYDGASA
PDDILYGEVV RREIRTFQKV FHNTAGNGCL GAIYGGAVKS PEYSWLAMIT FWYLHVKKGH
PDLVDAFYRP PLNDQAVTHL LFWGLAESKP DQAFGDPRNS FVTFRALRRF SDIAFFPHPR
PLTDDSGKVV RTVQEDNIDD WLAYIQQHIN EANQRYDQHK RGIPALTTID DYKPFLDLCH
RAGVAMFYAA PARMYRATLS DRAHFFTPRW EIAVDLTKDI GEEIKRRLEG LMAWLVEQDG
LVADESHAVG GFEEVAEGLP LFIPNVVMEA HRAVGYGRER HAMDVQDDLQ RLVTDIRAGR
LGSVNL