Gene Cagg_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1351 
Symbol 
ID7268643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1676209 
End bp1676886 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content52% 
IMG OID643566194 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002462694 
Protein GI219848261 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00188361 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000206018 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACGCGCA TACTCATTAT TGAAGATGAA ACTGAAATTG CTTCTTACCT ACGGCGTGGT 
CTAAGCCTTG AAGGCTATCA CGTTGATGTG GCGTTCGATG GGTTGCAAGG GTTGGAGATG
GCCTCAACCG GCAATTACGA TCTCGTCGTA CTTGACTTAA TGCTGCCGGT GATCGATGGC
TTCGAGGTAG CGCGCCGTAT CCGCGCCGCG TCAAATGTCC CGATCATTAT GCTGACGGCC
CGTGATGCTG TGCGTGATCG GGTGGCCGGC CTTGAAGCAG GTGCTGATGA TTATCTGGTA
AAACCGTTTG CGTTTGAAGA GTTATTGGCC CGCATCCGTG CCCAACTGCG CCGTCAACAG
ACGTATCAGC ACCAAGAGGT GCTTCGGTTT GCGAATTTGA CGCTTGATAC CCGTTCACGT
GAGTTGCGCG TGGGAGACCG TCGTGTTGAG CTAACGGCCA AAGAATACGA CCTGCTTGAA
CTCTTTATGC GTCACCCCAA TCAGGTGTTG ACCCGTGACG TTATTTACGA TCGGGTATGG
AATTACGATT TTGGGGGAGA GAGCAATATC ATCGAAGTGT ATGTGCGCTA TCTGCGCCAA
AAGCTAGAAG CGAATGGCGA ACCTCGGCTT ATCCACACGG TGCGTAGTGT AGGCTATATT
TTGCGGGAGG ATGCGTAG
 
Protein sequence
MTRILIIEDE TEIASYLRRG LSLEGYHVDV AFDGLQGLEM ASTGNYDLVV LDLMLPVIDG 
FEVARRIRAA SNVPIIMLTA RDAVRDRVAG LEAGADDYLV KPFAFEELLA RIRAQLRRQQ
TYQHQEVLRF ANLTLDTRSR ELRVGDRRVE LTAKEYDLLE LFMRHPNQVL TRDVIYDRVW
NYDFGGESNI IEVYVRYLRQ KLEANGEPRL IHTVRSVGYI LREDA