Gene Cagg_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1346 
Symbol 
ID7268638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1667101 
End bp1667811 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID643566189 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002462689 
Protein GI219848256 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.361751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000337078 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAGCAC CGCTAACGAT AAAAGTCTTG GTGATCGATG ACCACCCGCT CTTCCGGCAG 
GGGATCCGCT GGAGTCTGGA GAGTGCCCCT GATATAGAAG TGGTGGGAGA AGCCGAAAAC
GGTCAAGAAG CGATAAAGCT CACCGAACGC CTCATGCCCG ACATAGTGCT CGTCGACATC
AATCTACCCG GCTTAAATGG GTTGGAAGTG GCACGGGTAA TCAAGCGTCG TGAACCACGG
ACGGGGATTA TCGTGCTTAG TGTCTATGAA GACGACGATC AGTTGTTCCA AGCCATTAAG
GTGGGGGCAG CCGCTTTTAC ATCAAAAGAC ATTAGTCCTG ATGAATTAGT GCAGATGATC
CGTGAGGTTG CGCGCGGGCG CTACTTAATC AACGATGCAG TGCTGGCCCG TCCTAACGTG
GCAGCCCGGG TCTTACACCA ATTCCGCGAA CTCGCTGCAA CCGAAGAGGA AGATAGCGCG
AGTCTCTTCG CGCCCCTCAC GTCACGTGAG ATTGAGATTC TTGACTGTAT CGCCCGCGGT
CTCTCGAATA AAGAAATTGC GAACGAATTG AGTATTAGCG GGCAGACCGT TAAGAATCAC
ATTACCTCTA TTTTGTCGAA ACTCCAAGTC AACGACCGCA CGATGGCGGT GATCGTCGCG
ATTAAGAAGG GATGGATCAA GATGGGGTAT TCGCAACCGC CTGAAGGATA A
 
Protein sequence
MTAPLTIKVL VIDDHPLFRQ GIRWSLESAP DIEVVGEAEN GQEAIKLTER LMPDIVLVDI 
NLPGLNGLEV ARVIKRREPR TGIIVLSVYE DDDQLFQAIK VGAAAFTSKD ISPDELVQMI
REVARGRYLI NDAVLARPNV AARVLHQFRE LAATEEEDSA SLFAPLTSRE IEILDCIARG
LSNKEIANEL SISGQTVKNH ITSILSKLQV NDRTMAVIVA IKKGWIKMGY SQPPEG