Gene Cagg_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1342 
Symbol 
ID7268634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1661794 
End bp1662264 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID643566185 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002462685 
Protein GI219848252 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000398816 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAGC ACGATATTCG TTCTCATCTG CCGCACCAGC TCATTCACGA TGTGTACGTC 
CTGCTTGATG ATGGTGATCG GCGCGCATTA GCGCATACCA ACCTGACTCC GCTCGAGTTT
AATCTGCTCT TGCAACTCGA TCTTGAGCAG GGTCAGCGGC TTACCGATGT CGGCGCAAAG
TTGCTCTGCG TGAAGAGCAC GATTACCCGG TTAGTCGACC GACTCGAGCG TGACGGGTTA
GTACGTCGCA ACCCCGATCC CGACGACCGC CGGGCACAAC GTCTCATTTT AACACCACGC
GGTGCAGCCG TGCGTGCTGA GGCGCTAGCG ATGCATAATG CCGCGGTCGA ACGTCGGATG
AATCTGCTCG ATCCTGAAGA ACAAGAGCAA CTAACCCGGC TGTTGCTCAA ATTGCGCGAC
GGGTTGGCGG CCGATTTAGC TGCCCAGCAA GCTGTTGATA CCGAACGGTA A
 
Protein sequence
MKQHDIRSHL PHQLIHDVYV LLDDGDRRAL AHTNLTPLEF NLLLQLDLEQ GQRLTDVGAK 
LLCVKSTITR LVDRLERDGL VRRNPDPDDR RAQRLILTPR GAAVRAEALA MHNAAVERRM
NLLDPEEQEQ LTRLLLKLRD GLAADLAAQQ AVDTER