Gene Cagg_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1331 
Symbol 
ID7268622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1647712 
End bp1649070 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content56% 
IMG OID643566173 
ProductFormyl-CoA transferase 
Protein accessionYP_002462674 
Protein GI219848241 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00277298 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAG GCTCACGTCC GACAAAAACG ACCCAGTCAA CCACTGAGAT GACGGAGACT 
GAAACGCCTG CTGTAGCGAC GACAGACGTC GAAGCTGCAT CAGTCGCCGA TCCGGCCCCT
CCTGCTGCTG AACCGCAACC AGACCCGGCT GTAGTACGTG ATCGACTACC GCTCAGCGGC
ATTCGTGTGA TCGATGTCGG TAATTTCTTG GCCGGTCCTT ACGCAGCTTC AATTTTAGGG
GAATTTGGCG CCGAGGTGTT GAAGGTTGAA CATCCTCTTG GGGGCGACCC GATGCGCCGA
TTCGGCACGG CTACTACACG CCATGACGCT ACGCTAGCGT GGCTGAGTGA AGCACGGAAC
CGCAAGTCGG TAACCATCGA TTTGCGGCAG CAGGAAGGCG TGGAACTCTT TCTGAAGCTG
GTAGCGAAAT CTGATATTTT AGTCGAGAAT TTTCGCCCTG GTACGATGGA GGAGTGGGGG
TTATCGTGGC CGACGTTGCA GTCTGTCAAC CCCGGCTTGA TTATGCTGCG TGTATCGGGG
TACGGCCAAA CCGGTCCGTA CCGCCGCCGA TCCGGTTTTG CCCACATTGC CCATGCCTTC
AGCGGTCTAT CGTACCTTGC CGGCTTTCCC GGTGAAACGC CGGTCTTGCC CGGGACAGCA
CCGCTCGGTG ATTATATCGC CAGTCTTTTC GGTGCGATTG GGATCTTGAT CGCACTCCGC
CATCGTGAGA AGACCGGGCG TGGCCAGTTG ATCGATGTCG GGATTTATGA AGCCGTATTT
CGTATTCTTG ATGAAATTGC CCCGGCTTAC GGTCTGTTCG GCAAGATTCG GGAGCGTGAA
GGTGCAGGAA GCTTTATCGC TGTGCCCCAT GGCCATTTTC GCACCAAAGA CGGGAAGTGG
GTGGCGATTG CCTGTACCAC CGATAAGATG TTTGAGCGTT TGGCCGAAGC AATGGAACGG
CCCGAATTGG CTTCGCCCGA GTTGTACGGC GACCAACGGA AGCGCCTGGC AGCCCGCGAT
GTCGTGAATC AGATTACCAT TGAGTGGGTC GGTTCCCTAA CTCGCGATGA GGTGATGCGC
CGCTGCCTTG AAAAAGAGGT ACCGGTTGGC CCACTCAACA GTATTGCCGA TATGTTCAAC
GATGAGCATT TTCGGGCACG GGGCAATCTG GCTCGGATCG AAGCCGAGGG TGTCGGTGAA
GTGGTTGTTC CCAATGTGAT CCCGACTCTA TCTGAAACAC CGGGCCGGAT TACCAATCTT
GGGCCGTCGC TGGGTAATGC GACGTATGAG GTGCTCCGCG AGTTGCTTGG TATTTCTGCT
GAAGAGATCA AGCATTTGCG TAGCCGCAAA ATTATCTAG
 
Protein sequence
MAKGSRPTKT TQSTTEMTET ETPAVATTDV EAASVADPAP PAAEPQPDPA VVRDRLPLSG 
IRVIDVGNFL AGPYAASILG EFGAEVLKVE HPLGGDPMRR FGTATTRHDA TLAWLSEARN
RKSVTIDLRQ QEGVELFLKL VAKSDILVEN FRPGTMEEWG LSWPTLQSVN PGLIMLRVSG
YGQTGPYRRR SGFAHIAHAF SGLSYLAGFP GETPVLPGTA PLGDYIASLF GAIGILIALR
HREKTGRGQL IDVGIYEAVF RILDEIAPAY GLFGKIRERE GAGSFIAVPH GHFRTKDGKW
VAIACTTDKM FERLAEAMER PELASPELYG DQRKRLAARD VVNQITIEWV GSLTRDEVMR
RCLEKEVPVG PLNSIADMFN DEHFRARGNL ARIEAEGVGE VVVPNVIPTL SETPGRITNL
GPSLGNATYE VLRELLGISA EEIKHLRSRK II