| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1307 |
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| Symbol | |
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| ID | 7268598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 1606139 |
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| End bp | 1608097 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643566150 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002462651 |
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| Protein GI | 219848218 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000323164 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTATGA GTGACCGGGA ATATCTATCA CGTGAGGCAG CGCGGTCGTT GGCGCGCCTA
TTGCCGCGCG TGGAGCAATC GTTTACGGCT GCCGGTGGTA ATGCTGCTGA TTGGGCTGCA
TTCGAGCAGC GATTGCGCCG GGAATGGCCT CGTCTGTTTG GGTTGTTGCT GAGCTTGTAC
GGACACCAGT ACGACTTTTT TTACCATCTT GAACAGTTGT TAATCACGAT GGCCAACAGT
TGGTACGAGC GCCCAGATTG GCTCAAGCAG CGCGATGCAG TACGCGAAGC TGATCATGAG
TGGTTCCAAT CGGAACGGAT GATAGGTGGC GTACTCTATG TCGATCGCTT CTGTGGCACC
CTCCATCGGC TGCGCGAGTT TATCCCCTAT TTCAATGAGC TAGGTTTGAC CTATCTGCAT
TTGATGCCGT TGTTTGAAGC ACCGGCAGGC AATAACGATG GTGGCTATGC AGTCAGTAGC
TACCGGCGGG TGAATTCGCA GATCGGTACT ACGGAAGAGT TGGCGGCATT GGCCCGTGAA
CTTGAGTGCG CCGGTATCAG TCTGGTGTTG GATTTCGTCT TCAACCACAC CTCTGACGAA
CACGAATGGG CGCAGCGGGC GCAGGCCGGT GATCCAGATT ATCAAGAGTT CTATTTCCTC
TTCTCTGATC GTACTTTGCC TGATGCATAC GAGCGCACAC TACGCGAGAT ATTCCCGACG
GTACGGCGCG GTAGCTTTAC GTGGCGACCC GATATGCAGC GCTGGGTGTG GACGACCTTC
AACAGTTTTC AATGGGACCT CAACTATGCC AATCCAGCCG TGTTTCGGGC GATGGCTGCC
GAGATGCTCT TTCTTGCTAA TCTGGGGGTG GCCGTTCTGC GGCTTGATGC GGTACCGTTC
ATTTGGAAGC GGATGGGCAC CAACTGTGAG AATCAGCCGG AAGCACATCA GATTATCCAA
GCGTTTAATG CGATTGCTCG CATTGCTGCA CCGGCTCTGC TCTTTAAATC AGAGGCAATT
GTCCATCCTG ATGATGTCTT GAGTTATATC AGTCCGCATG AGTGTCAATT ATCGTATAAC
CCACTCTTGA TGGCATTACT GTGGGAAACG TTAGCGACGC GCGAAGTAAA ATTGTTAGCT
CACTCACTGA GCCATCGCTT CCGGTTACCG GCGGGTTGTG CGTGGATCAA CTATCTCCGT
TCACACGACG ACATTGGCTG GACGTTTGAT GACAACGATG CGCGTGCGGT TGGGATTGAT
CCGTGGGGCC ACCGTCAGTT TCTCAACGCT TTCTATACCG GGCGTTTTCC CGGTTCGTTT
GCTCGCGGTT TACCATTCCA AGAAAACCCT GATACCGGTG ATGCGCGTGT ATCGGGGACA
CTGGCATCGT TGGCGGGGCT GGAACAGGCT CTCAGTAATG GTGATCCGAC CGCTATCGAG
ACGGCAATCC GGCGGATTCT CTTGCTGCAC AGCGTTATCC TGAGTATCGG TGGGATTCCG
CTGATCTATC TGGGTGATGA GGTAGGGACA CTCAACGATT ATGGGTATGT CAACGATCCG
GCCAAAGCCG ATGACAGTCG TTGGGTGCAT CGTCCGGTAC GTAATCAAGC GGCGATGGAT
CGGCGCCACG ATCCGTCAAC GGTACCGGGA CGGATTTTTA GTGAATTAGT CAAGTTGATT
CGATTGCGGA CTTCGTTGCC GGCGTTGCGC GATGGTGCAA TGGAAGTTGT GCGTAGCGAT
AATCGGCACG TATTGGCGTA TGTGCGGCAA ACCGGCGCTC AGCGCGTGTT GGTACTGACC
AACTTCTCGG AGTATCCGCA GACCATTGCC GGTAATTTGC TACGTATGTA TGGCCCCGGT
GTGGAACTGT TCGATCTGGT GAGTGATCAA CCGGTTTCGG CGAATGAAGC GCTCGTACTG
CCACCGTACC GATTTGTCTG GTTGACGCCG GTGCGTTAG
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| Protein sequence | MGMSDREYLS REAARSLARL LPRVEQSFTA AGGNAADWAA FEQRLRREWP RLFGLLLSLY
GHQYDFFYHL EQLLITMANS WYERPDWLKQ RDAVREADHE WFQSERMIGG VLYVDRFCGT
LHRLREFIPY FNELGLTYLH LMPLFEAPAG NNDGGYAVSS YRRVNSQIGT TEELAALARE
LECAGISLVL DFVFNHTSDE HEWAQRAQAG DPDYQEFYFL FSDRTLPDAY ERTLREIFPT
VRRGSFTWRP DMQRWVWTTF NSFQWDLNYA NPAVFRAMAA EMLFLANLGV AVLRLDAVPF
IWKRMGTNCE NQPEAHQIIQ AFNAIARIAA PALLFKSEAI VHPDDVLSYI SPHECQLSYN
PLLMALLWET LATREVKLLA HSLSHRFRLP AGCAWINYLR SHDDIGWTFD DNDARAVGID
PWGHRQFLNA FYTGRFPGSF ARGLPFQENP DTGDARVSGT LASLAGLEQA LSNGDPTAIE
TAIRRILLLH SVILSIGGIP LIYLGDEVGT LNDYGYVNDP AKADDSRWVH RPVRNQAAMD
RRHDPSTVPG RIFSELVKLI RLRTSLPALR DGAMEVVRSD NRHVLAYVRQ TGAQRVLVLT
NFSEYPQTIA GNLLRMYGPG VELFDLVSDQ PVSANEALVL PPYRFVWLTP VR
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