Gene Cagg_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1299 
Symbol 
ID7268590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1598633 
End bp1599253 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID643566142 
ProductGTP cyclohydrolase II 
Protein accessionYP_002462643 
Protein GI219848210 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00104541 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.135969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG AATCTTCACC CGTTCTCATT ACCCGTGCGG CGATGGCCGA TTTACCAACC 
AAATTCGGTC ATTTTCAGAT TATCGTCTAT CTCGATGCTG AACAGAAAGA ACAGATCGCG
CTGACGTGCG GTGACCTAAA CGGCTCAGAG CCGGTCCTTA CCCGACTCCA TTCCGAATGC
TTAACCGGAG ATGTCTTCGG CTCACACCGT TGCGACTGCG GCGAACAACT TGCTGCCGCG
CTCAATGCAA TTCAGCAGGC CGGGCGCGGC GTGTTGCTCT ACCTGCGGCA AGAAGGTCGT
GGGATTGGGT TGGTCAATAA GATTCGGGCG TATGCGCTCC AACAACAAGG ACTAGACACA
ATTGACGCAA ATCGCGCTCT CGGACTACCC ATCGATACTC GCGACTACGG CGTTGCAGCG
GCTATCCTGC GTGATCTTGG CGTTCACACC GTCCGTCTTC TCACCAACAA TCCCGCCAAA
ATCACCGGTC TCGAAGAGTG TGGCATTACG GTATCCGAAC GAGTTCCGCT TCAAATTCCG
GCAAACGTGT ATAACGCCCT GTATCTCTTA GCCAAACAAC TCCGTATGGG GCACCTACTC
GATAGCCGAA TGCTTTTGTA A
 
Protein sequence
MTTESSPVLI TRAAMADLPT KFGHFQIIVY LDAEQKEQIA LTCGDLNGSE PVLTRLHSEC 
LTGDVFGSHR CDCGEQLAAA LNAIQQAGRG VLLYLRQEGR GIGLVNKIRA YALQQQGLDT
IDANRALGLP IDTRDYGVAA AILRDLGVHT VRLLTNNPAK ITGLEECGIT VSERVPLQIP
ANVYNALYLL AKQLRMGHLL DSRMLL