Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1298 |
Symbol | |
ID | 7268589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1597428 |
End bp | 1598636 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643566141 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002462642 |
Protein GI | 219848209 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.148337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.167522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAA ACCATCATCG CTACATTGTC GCCGGTTCGG TCCTGGTTGA TATGCTGGGA TACGGCTTGA TTATGCCGTT ACTCCCGTTT ATGGTACAGA AGTGGGGAGG TAACGCGACG ATCATCGGGT TGCTCGGCTC ACTGTATGCG CTGATGCAAT TGCTGGCGGC ACCGCTGCTC GGGGCGCTTT CCGACCGCGT CGGACGACGA CCGGTTATTT TGGGCTGCTT ATTCGGATCG GCATTGGCAT ATAGCTGGCT AGCCCTCGCC GACTCACTCC CTTTACTGGC GGCCGCCATC GCTCTTGGCG GGGTAGCCGG TTCGAGCATG CCGGTGGCGC AGGCTTACAT TGCCGATGTC ACGTCGCCAA CCGAACGAAC TCACGGCTTC GGGCTGCTAG GTGCGGCATT TGGGCTTGGC CTGATCGGTG GAGCTGCTAT CGGCGGCTTC CTCAGCCAGT TCGGATTAGC CCTGCCCCCA CTCGTCGCCG CTACCATTGC CCTGAGCAAC GCTATCTACG CCAGCATTGT CTTACCCGAG TCGTTACCAC CAATGCGCCG CCATGCATCG TCGTTGCCCT TCCGCAACCT GTTCGGATCG GCGCTCATTG CGTTACAAGC CTCATCGGTG CGACCGTTGT TGATCGCGGT GATGCTACTC AACATCACAT TCGCCGGTTT ACAAAGTAAT ATTGCACTCT ACACACTCAC CCGTTTCGGC TGGGGACCAG ATCAGAATGC GATCTTGTTT GTCTTTGTGG GGCTGTGTGC TGCCCTAACG CAAGGTGTGC TCATCGGCAA GTTACAATCA CGGCTTGGCG ATGCATGGTT AGCCAGCGGT GGTCTGGGGC TGATGGCCCT CGCCTTTGCC TTTGTCAGTG GTGTATATAC GGATTGGCTT CTCTTTCCGC TCGCCGCGCT TCTCGCCATC GGGATGGGGC TAGCCGTACC GGCCATCACA AGCCTCGTCT CACGACAGGC CGGTGAAAAC CGGCAAGGAA TTGTGCTAGG CGGGATGCAG GCATTGATCA GTGTAGCTCT CCTGATCGGG CCGGCCAGTT TCGGTTTCCT CTTCGACCGG TTTGGCAGCA CTACACCCTA TCTCGCAGGA GGCATGCTGT TGATCGGCGC ATGGCTTATG ACAACAATAA CCATCGCCAA CCCGTCTATT CTTATTCGTT CTGCTGAAGA TCCAGAGGCT CAGGTATGA
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Protein sequence | MTLNHHRYIV AGSVLVDMLG YGLIMPLLPF MVQKWGGNAT IIGLLGSLYA LMQLLAAPLL GALSDRVGRR PVILGCLFGS ALAYSWLALA DSLPLLAAAI ALGGVAGSSM PVAQAYIADV TSPTERTHGF GLLGAAFGLG LIGGAAIGGF LSQFGLALPP LVAATIALSN AIYASIVLPE SLPPMRRHAS SLPFRNLFGS ALIALQASSV RPLLIAVMLL NITFAGLQSN IALYTLTRFG WGPDQNAILF VFVGLCAALT QGVLIGKLQS RLGDAWLASG GLGLMALAFA FVSGVYTDWL LFPLAALLAI GMGLAVPAIT SLVSRQAGEN RQGIVLGGMQ ALISVALLIG PASFGFLFDR FGSTTPYLAG GMLLIGAWLM TTITIANPSI LIRSAEDPEA QV
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