Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1280 |
Symbol | |
ID | 7266266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1574140 |
End bp | 1575657 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643566122 |
Product | threonine dehydratase |
Protein accession | YP_002462624 |
Protein GI | 219848191 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACC CTGATTTTGC CTACGTGCAA CGTATTCTCA CCAGTCGAGT ATACGATGTG GTGAAAGAGA CTCCATTGCA CTTTGCACCG TTATTGAGTG AGCGGCTTGG CACAAAGATT TTTTTTAAGC GTGAGGATCT CCTCCCAATC TTCTCGTTTA AGCTGCGTGG TGCCTACAAC CGTATGGCCC ATCTTAGCCC TGCCGAGAAG GAGCGGGGTG TGATTACGGC TTCGGCCGGT AATCACGCCC AAGGGGTGGC TTATTCTGGC CAGCAGTTGG GCATTCGCAC GCTGATCGTG ATGCCGGTGA CAACGCCGGA GATTAAAGTT GCCGCCTGCC GTCGTCGTAA TGCCGAGGTC GTGCTCTACG GCGATAGCTA TAGTGACGCC GAAGCCTACG CTTACCGCTT ACAACAAGAG TTGGGGCTGA CGTTTATCCA TCCCTATGAC GATCCGTTGG TGATTGCCGG CCAGGGGACG ATTGGACTCG AGATTTCGCA GCAGATGCGG GCTGAGCGCT ATCGGGTTTT TGTGCCGGTT GGTGGCGGCG GTTTGATCGC CGGAATTGCC ATCTTTCTCA AGAGCATCAA CCCCAATATC GAGATTATCG CCGTTGAGCC AGATGATTCC GATGCGATGT ATCAGAGCGT GCGGGCCGGT TATCGGGTGA CGCTCGATCA AGTTGGCATT TTTGTTGATG GCGTAGCGGT GCGGCGCGTC GGCGAGCATA CCTTTGCGAT TGTGCAGCGC TACGTTGATG ATTTTGTCCG CGTTACGACC GATGAGGTGT GCGCGGCGAT TAAGGATGTG TTTGAGGATA CGCGCGCAAT TATGGAGCCG GCGGGGGCGT TGGCTGTTGC CGGTTTGAAG CGATATAGTG CCGAACACGG TGCCGATCTG CCGGTGGTTG CACTGACGTG CGGTGCGAAT ATGAACTTTG ATCGCCTGCG CCACGTTGCC GAACGGGCCG AGATCGGTGA ACGGCGCGAG GCACTGTTTG CCGTGACCAT TCCCGAACGA CCCGGTTCGT TTAAACAGTT TTGCCGGGTG ATCGGGCCGC ACAATATCAC CGAGTTCAAC TATCGCTATG CACCGCGTCC CGATGCCAAC GTCTTTGTCG GTATCCAATT GACCGACGCG CGTCAGCGCC ATGAACTGGC CGATCGGTTG CGTCAGGCCG GCTATACCGT CGTTGACTTG ACCAACGATG AGTTGGCGAT TATCCATCTG CGCCATATGG TTGGGGGACG CGCACCGGAA GCAACCGATG AGCGTCTCTT CTCGTTCGAG TTTCCCGAAC GACCGGGGGC GTTGTTGCAG TTTCTCGAAT CGCTCGATGC CTCGTGGAAT ATTAGTCTGT TCCACTACCG CAATCACGGC AGCGCCCATG GTCGGGTGCT GGCCGGGATT CAGGTGCCTG ATGCTGACCT TGATCGGTTT TACGCTTCAT TGTCGCGCCT CGGCTATCCC TATCGCGAGC AGAGTGATAA TCCGGCGTAT CATCTCTTTC TGAAGTAG
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Protein sequence | MPNPDFAYVQ RILTSRVYDV VKETPLHFAP LLSERLGTKI FFKREDLLPI FSFKLRGAYN RMAHLSPAEK ERGVITASAG NHAQGVAYSG QQLGIRTLIV MPVTTPEIKV AACRRRNAEV VLYGDSYSDA EAYAYRLQQE LGLTFIHPYD DPLVIAGQGT IGLEISQQMR AERYRVFVPV GGGGLIAGIA IFLKSINPNI EIIAVEPDDS DAMYQSVRAG YRVTLDQVGI FVDGVAVRRV GEHTFAIVQR YVDDFVRVTT DEVCAAIKDV FEDTRAIMEP AGALAVAGLK RYSAEHGADL PVVALTCGAN MNFDRLRHVA ERAEIGERRE ALFAVTIPER PGSFKQFCRV IGPHNITEFN YRYAPRPDAN VFVGIQLTDA RQRHELADRL RQAGYTVVDL TNDELAIIHL RHMVGGRAPE ATDERLFSFE FPERPGALLQ FLESLDASWN ISLFHYRNHG SAHGRVLAGI QVPDADLDRF YASLSRLGYP YREQSDNPAY HLFLK
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