Gene Cagg_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1271 
Symbol 
ID7266257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1562361 
End bp1563758 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID643566113 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_002462615 
Protein GI219848182 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA CGGCTCTGTT ACTCATCGGT CATGGTACCG ACGATGCTGC CGGTATCGCC 
GAATACCATC AGTTGGCGGC GTTGGTACAA GAACGCTTCG GTCTGTTTGT GCAGCCATGT
TTTCTTGAAT TGGCCGATCC GTCGATCGGG CAAGCGATAG ATGCCTGCGC TCGCGCCGGT
TATCAGCGCA TCGTCGCATT GCCGCTCTTG CTCGGCGCGG CTGGCCACCA AAAGAACGAT
ATTCCGGTCG CGTTGCGCGA GGCGCGCGCA CGCTGGCCCG AACTCACCAT CCACTACGGC
GCGCCACTGG GGGTGCAGTA TTCGCTGCTC AAAGCTCTCG GCGACCGCTT GGCTGAAGCC
GAAGCGGCAG CGCCGCCAGT ACCGCGCGCC GAGACGGCGT TGGCCTTGAT TGGCCGCGGC
AGCAGTGATC CCGATAGTAA TGCCGATGTC GCGCGGATGG CCCGCTTGCT CTGGGAAGGG
CGTGGTTATG CGCGGGTCAT GTATGGTTTT TACAGCATCA CAACGCCGCG TGTCCCCGAA
ACCATCGATG CGTGTATCGC ACTCGGCGCA CGGCGGGTGA TCGTCATTCC CTATCTGCTC
TTTACCGGGC GGATTTTGCA GCGGATTGAG CAACAAGTGA TCGCAGCGCG CCAACGCTAT
CCCGATCACG ATCTCGTGCT TACCGGCCAT CTTGGGTTGC ACGAGGGTGT GATCGCGGCA
ATCGAGCAGC GGTTTCACGA AGCGGTGCAG GGACAAGTCA CCGTCAATTG CGATGTGTGC
AAGTATCGGC GGCTCTTCCC CGGCTTCACC GCCGATTTTG GCCGACCCCA AACCAGTGAC
CACGAGCATG GGCTGCGTGG TGAAACACCG ACCAATCGGT TGGAGACGAT CTTGCCGCCG
CGCTACCGTG GTGGGCGGGC GGTGAGTGCG GCGCCGATGA CGGCTGCACC GCTTGTCTAT
GATGAAACCG GACAAGTAGC GTGGGATCGG GTGTGGGGTG GTGACGATCC CAACAATCCT
TTCTGCGAAC TCGCATTAGC CGGCGGTCCG CCGCATCGCG GTACCCTGCT CGAACCGGTC
GATCCGGCGA CGGTGCATGC CGATCCTGAA GGGTATGCTC GAGTGATCAC CGAATTGGCC
CGTGCGCTAA CGATGGTCAC CGATCTGCCG GTCAAGACCG ATACCGCTCC CGGTTGGATT
GGGCTAGTTT GTGAGAGCGA AGAGATGGCG ATCTGGCTGT TGCGGGCGAT TATCGTGGAA
AATGTCAGTG TGCGGCGTGA AAATCGGGTC TTGCTGCTCC CGGCGGGACC GCAGTTCCGG
CTCGAAGCCG AGATCAAGAA TGTTGTGACC GCCGTTGCCA AGACCTACCA CTACTGGAAG
GAGCATATCC GCCAATGA
 
Protein sequence
MNDTALLLIG HGTDDAAGIA EYHQLAALVQ ERFGLFVQPC FLELADPSIG QAIDACARAG 
YQRIVALPLL LGAAGHQKND IPVALREARA RWPELTIHYG APLGVQYSLL KALGDRLAEA
EAAAPPVPRA ETALALIGRG SSDPDSNADV ARMARLLWEG RGYARVMYGF YSITTPRVPE
TIDACIALGA RRVIVIPYLL FTGRILQRIE QQVIAARQRY PDHDLVLTGH LGLHEGVIAA
IEQRFHEAVQ GQVTVNCDVC KYRRLFPGFT ADFGRPQTSD HEHGLRGETP TNRLETILPP
RYRGGRAVSA APMTAAPLVY DETGQVAWDR VWGGDDPNNP FCELALAGGP PHRGTLLEPV
DPATVHADPE GYARVITELA RALTMVTDLP VKTDTAPGWI GLVCESEEMA IWLLRAIIVE
NVSVRRENRV LLLPAGPQFR LEAEIKNVVT AVAKTYHYWK EHIRQ