Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1243 |
Symbol | |
ID | 7266229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1520850 |
End bp | 1522556 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643566085 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_002462587 |
Protein GI | 219848154 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACA CCACCGAACC GAGTGTAGAA TACGTCCGTA TTTTCGACAC GACCCTCCGT GATGGCGAGC AAGCTCCCGG CTGCACAATG ACCCTGGAGG AGAAGCTAGA AGTCGCCCGC CAACTTGCCC GCCTCAACGT TGATATCATC GAAGCCGGCT TCCCTGCGGC CTCGCCCGGC GACTGGGCTG CCGTTCACGA GATTGCCCGC GAAATCGGTA CGCCCGATGG CCCGATTATC GCGGCGCTGG CCCGCGCCAA CCGTGACGAT ATTGACAAGG CGTGGAGCGC GATCCAACCC GCCGCCAAGA AGCGCATTCA CACCTTTATG TCAACTTCAG ACATTCATCT GGAGTATCAA TTCCGCAAGA CCCGGGCTGA AGCGCTGCAA CTCATCCACG AGATGGTGAG CTATGCCCGT TCATTGTGCG AGGATGTCGA GTTCTCACCG ATGGATGCCG GACGCACCGA TCCGCTCTTC TTGCGCGAGG CGGTGGCGGT AGCGGTGGCT GCCGGTGCCA CGACGTTGAA CATCCCCGAT ACGGTCGGCT ATCTCACCCC CGATGAGTAC GGTGCAATGA TCCGTGACTT GCGCGAGAAC GTGCCGGGGA TCGAGAACTG CATCCTCTCG ACCCACTGCC ACGACGACTT AGGCATGGCC GTGGCCAATT CACTGGCCGG AGTGCGAGCA GGCGCACGGC AGGTGGAGTG TACGATTAAC GGGATCGGTG AGCGAGCCGG CAATGCTTCA CTCGAAGAAG TGGTGATGGC GCTGCATACC CGCCAACAGT ATTACGGACT GCGCACCCGC ATCAATACGC GCGAGATTGC ACGGACCTCA CGACTGGTCA GTAGTTTTAT CGGTGTGCCC GTACCGCCGA ACAAGGCGAT TGTGGGGGCG AATGCGTTTG CCCACGAATC GGGTATCCAT CAAGATGGCG TTTTGAAGTA TCGCCAGACC TACGAGATCA TGAGCGCCGA GACGGTCGGT TTCGATAGCA ATACGCTGGT GCTCGGTAAA CACTCTGGGC GTCATGCTTT CCGCAAGTAT CTCGAAGAGA AGGGGTACAA GCTGAACGAT GACGAATTCC AGCATGTCTT CGCCCGCTTT AAAGATCTGT GTGACCGCAA GAAGAAGGTT GACGATCGCG ACATCGAGGC GCTGATCGCG GGTGAGATGC AACACACCCC AGAGCTGTAT AAACTCGATC ACGTGCAGTA CGCTTCAGGG GTTGGCATGA TCCCAACCGC GACGGTGCGG CTGATCGGTC CCGATGGTCA GGCCAAAGTG GATAGCGCAC AAGGTACCGG CCCGGTCGAT GCGGTGTATC AGGCGATTAA CCGGATCATT CAGCGCCCAA ACGAGTTGAT CGAGTTTTCG ATTAACGCCA TTACCGAGGG GCTTGATGCC GTTGCCGAAG TAACGGTTCG CATTCGCGAG CAGGGTTCGT CGGCACGCCT TTCGGAGAGT AGTAGCACTG CAACGAGCTT GACCGGTCGG CGACAGTCCC AGCAGATCTT TAGTGGGTAT GGTGTTCATA CCGACACGAT TGTTGCCGCT GCGCAAGCGT ATATGGCGGC GCTGAATAAG ATGCTGGCCG CCCGCCAAGA GCGGATCAAG GCTGAGGCGA TGGCGTATTC TGCCGGCTAT AGTGGTGAAG CTACAACCCT GCCGGTGGAT ATTTTTGGCG GTAGTACGTT GGGGTAG
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Protein sequence | MTNTTEPSVE YVRIFDTTLR DGEQAPGCTM TLEEKLEVAR QLARLNVDII EAGFPAASPG DWAAVHEIAR EIGTPDGPII AALARANRDD IDKAWSAIQP AAKKRIHTFM STSDIHLEYQ FRKTRAEALQ LIHEMVSYAR SLCEDVEFSP MDAGRTDPLF LREAVAVAVA AGATTLNIPD TVGYLTPDEY GAMIRDLREN VPGIENCILS THCHDDLGMA VANSLAGVRA GARQVECTIN GIGERAGNAS LEEVVMALHT RQQYYGLRTR INTREIARTS RLVSSFIGVP VPPNKAIVGA NAFAHESGIH QDGVLKYRQT YEIMSAETVG FDSNTLVLGK HSGRHAFRKY LEEKGYKLND DEFQHVFARF KDLCDRKKKV DDRDIEALIA GEMQHTPELY KLDHVQYASG VGMIPTATVR LIGPDGQAKV DSAQGTGPVD AVYQAINRII QRPNELIEFS INAITEGLDA VAEVTVRIRE QGSSARLSES SSTATSLTGR RQSQQIFSGY GVHTDTIVAA AQAYMAALNK MLAARQERIK AEAMAYSAGY SGEATTLPVD IFGGSTLG
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