Gene Cagg_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1195 
Symbol 
ID7267944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1475005 
End bp1475412 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content58% 
IMG OID643566038 
Productribonuclease P protein component 
Protein accessionYP_002462540 
Protein GI219848107 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000104376 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00023065 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGACGCG CAAACCGGCT TCGTCGGCCT GCACAATTCC GTCGAGTACG CCAAACGGGA 
CGCACCTTTT CTTCGGCCTG GCTGACCCTC ACCGTCGCAC CGGGTCGGCG CGATGGTGTA
CGCTGTGGTT TCATCACCGG TCGTCGCCTT GGCAAGGCCG TCCAGCGCAA CCGTGCCCGC
CGACGAGTCC GTGAGGCAGT GCGCTTGCTT TTACCGTCAC TTACCACCGG TTACGACCTA
CTTTTTGCTA TTCGTTCACC AGAGGTGATT GAGGCGCCAT TTAGCCAGTT GCAAGCCGAT
ATTATTCGTT TACTCCGGCA GGCCTGCCTG CTCACAACAC CTGAAACAGA ACCTGTTTCA
CCGGTATCAC CTACCTCACT ACCACAAAAC GAACGGGGAT CGCCATGA
 
Protein sequence
MRRANRLRRP AQFRRVRQTG RTFSSAWLTL TVAPGRRDGV RCGFITGRRL GKAVQRNRAR 
RRVREAVRLL LPSLTTGYDL LFAIRSPEVI EAPFSQLQAD IIRLLRQACL LTTPETEPVS
PVSPTSLPQN ERGSP