Gene Cagg_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1180 
Symbol 
ID7267929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1455112 
End bp1455747 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID643566023 
Productcapsular exopolysaccharide family 
Protein accessionYP_002462525 
Protein GI219848092 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0081871 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACATCGT CGCCTGAGCA AGTGCTGATC ACGTTACGCG AACCGGCATC TGCCGCCGCC 
GAAGCGTACC GCACTCTGCG CACCAACATT CTCTTCTCTA GTCTTGACAA GCCAATCCAT
ACGCTGTTAC TCACTGCCGC CGAACCGACG CCGGAAAAGA GTTTGACTGC CGCCAACCTC
GCAGTAACGA TGGCCCAAGC CGAACAGCGC GTACTCTTAG TTGACTGCGA TCTACGCCAA
CCGTCACTTC ATACCCTTTT TGGCCTCTCC AACGAGCAGG GCCTTACCAG CTCGATCCTG
GATCAGGATG CACCACTGGC CATTCAGCCT ACCGACATAC CCGGCTTGAG TCTCCTACCC
AGCGGGCCAC TTCCCCCGCG CCCTGCCGAT CTGCTCGGTT CGCGTCGGAT GGAAGGCTTA
TTGGCTCGGC TTCGCCAGAC TGCTGACATC GTGATCTTCG ATACACCACC GGTACAAACC
TTCACCGATG CACTGGTACT GTCTACCCGC GTCGATGGTG TGTTGTTGGT CGTACAAGCC
GGTCGTTCCC GCCGAGACCG GGTCCGTGAG GCACGCCAAA AGTTGGAAAA GGTGAAGGCG
AACGTGCTCG GTGTCGTGCT GAGTGGTGTA CGATAG
 
Protein sequence
MTSSPEQVLI TLREPASAAA EAYRTLRTNI LFSSLDKPIH TLLLTAAEPT PEKSLTAANL 
AVTMAQAEQR VLLVDCDLRQ PSLHTLFGLS NEQGLTSSIL DQDAPLAIQP TDIPGLSLLP
SGPLPPRPAD LLGSRRMEGL LARLRQTADI VIFDTPPVQT FTDALVLSTR VDGVLLVVQA
GRSRRDRVRE ARQKLEKVKA NVLGVVLSGV R