Gene Cagg_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1174 
Symbol 
ID7267923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1447445 
End bp1448221 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID643566017 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_002462519 
Protein GI219848086 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.04859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG AAACGCTTGT GCTCAGCACT ATCGAAGGCC CCGTTGCAAT CCTTACGCTC 
AATCGACCAC AAGCACTCAA TGCCCTTAGC CCTGCCCTCA TCGACGCACT CATCCGCCAT
CTTGAGCATT GCGATAACGA CGATACGATC CGGGTGATCA TTATCACCGG CGCCGGTCGC
GCCTTTGCCG CCGGCGCCGA CATCAAGGCG ATGGCCGATG CGACGCCGAT CGATATGCTT
ACAACCGATA TGATTGCCCG CTGGGCGCGG ATTGCGGCGG TGCGCAAACC CGTGATCGCA
GCCGTGAACG GATTTGCCCT CGGTGGTGGC TGCGAGTTGG CTATGATGTG TGACATCATT
CTTGCCAGTG AAACAGCCCA ATTCGGTCAA CCCGAAATCA ACATCGGCAT TATCCCCGGC
GCCGGTGGCA CCCAACGCCT GACCCGCGCA ATTGGCCCAT ACCGTGCAAT GGAGATGGTC
TTAACCGGTG CTACCATCAG TGCCCAAGAA GCTTACGCCT ACGGCCTGGT GAATCGGGTA
TGCCCACCCG ATAGCCTGCT TGATGAAGCC CGCCGGTTGG CCCAGACCAT TGCAGCCAAG
CCGCCGCTCG CTGTGCGTTT AGCCAAGGAA GCCGTGCGCG CTGCGGCTGA AACGACCGTG
CGTGAAGGGT TAGCCATTGA ATTGCGTAAC TTTTATCTGC TCTTTGCCAG TGCCGATCAG
AAAGAGGGCA TGCGAGCCTT TATCGAAAAG CGTACAGCCA ACTTCAGTGG TCGCTAA
 
Protein sequence
MSDETLVLST IEGPVAILTL NRPQALNALS PALIDALIRH LEHCDNDDTI RVIIITGAGR 
AFAAGADIKA MADATPIDML TTDMIARWAR IAAVRKPVIA AVNGFALGGG CELAMMCDII
LASETAQFGQ PEINIGIIPG AGGTQRLTRA IGPYRAMEMV LTGATISAQE AYAYGLVNRV
CPPDSLLDEA RRLAQTIAAK PPLAVRLAKE AVRAAAETTV REGLAIELRN FYLLFASADQ
KEGMRAFIEK RTANFSGR