Gene Cagg_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1171 
Symbol 
ID7267920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1444276 
End bp1445376 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID643566014 
Productglycosyl transferase group 1 
Protein accessionYP_002462516 
Protein GI219848083 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.059053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCG ATATTGACGC GAGCCGGGCA ACCATCGAGC AACGCACCGG GACGGAACGT 
TATAGCCGGG AAGTGATTGC AGCTCTCGAT CGGCTTGCGC CACCGCAGAT CAGTTTGCGT
CTTTATATCA ACGGCGGGCG CGAGCGATTA CCGCCGTTGA GTTCGCGGGT GGTGATCCGC
GATGTGCGTT TGCCCCGTCT GTGGACGCAT CTGCGTTTGG GGCCGACCAG TTGGCTAGCT
CGACCGCACG TTCTCTTTGT GCCGGCCCAT GTCGTGCCGT TGTTGCATCC GCCTACCGTC
GTGACCATCC ACGATGTGGG GTATCGGGTC TTTCCGGCAG CGCATACGGC GCGTCGGCGG
CTCGAACTCG AACTAACGAC GTACTGGAGT GTGCGTGCTG CGCGCCATGT ATTGACCATT
TCCCACGCGA CGAAGCGCGA TCTCGTTGCG TGGTATGGGG TCGATCCACA GCGGATAACG
GTGACACATC TCGGTGTGAG TGCTGGATTT GCACCGCCGG CAGATCCGCA GGCTATTGCC
GAGGTGCGCA TGCGGTACGG TATACACCGG CGTCCGTATG TGTTGTATAT CGGTACGGTG
CAACCACGCA AAAATCTGGT GCGCGTGATT GATGCACTTG CCCGCACGCT TACCGCCGGC
TACGATCTTG ATCTGGTGAT TGCCGGGAAG CAGGGCTGGC TAAGTGAGCC GATTGTGCGG
CGCGCCGCCG AATTGGGGAT TACGCATCAC GTGCATTTTA CCGGTTATGT GGCAGATGCC
GATCTGCCGG CACTGTTGGC AGGGGCGCAG GCATTTGTGT TTCCCTCGCT GTACGAAGGG
TTTGGCATGC CGGTGCTTGA GGCAATGGCG TGTGGCACGC CGGTGATTAC CAGTACGATG
TCGTCGTTGC CTGAGGTGGC CGGTGATGCG GCGTTACTCG TTGATCCATT GGACACCGAC
GCGATTGCGT GGGCGATCAT GCGTTTGTGC GGTGATGAGA ACCTGCGAAC CGATTTGCGA
TGGCGGGGCT TAGCACGGGT ACGCCAATTT ACATGGGAGG AGTGCGCTCG GCGGACGCTC
GAGGTGTTGA CGGCGGTATG A
 
Protein sequence
MVIDIDASRA TIEQRTGTER YSREVIAALD RLAPPQISLR LYINGGRERL PPLSSRVVIR 
DVRLPRLWTH LRLGPTSWLA RPHVLFVPAH VVPLLHPPTV VTIHDVGYRV FPAAHTARRR
LELELTTYWS VRAARHVLTI SHATKRDLVA WYGVDPQRIT VTHLGVSAGF APPADPQAIA
EVRMRYGIHR RPYVLYIGTV QPRKNLVRVI DALARTLTAG YDLDLVIAGK QGWLSEPIVR
RAAELGITHH VHFTGYVADA DLPALLAGAQ AFVFPSLYEG FGMPVLEAMA CGTPVITSTM
SSLPEVAGDA ALLVDPLDTD AIAWAIMRLC GDENLRTDLR WRGLARVRQF TWEECARRTL
EVLTAV