Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1050 |
Symbol | |
ID | 7268422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1299520 |
End bp | 1301322 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643565895 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_002462400 |
Protein GI | 219847967 |
COG category | [C] Energy production and conversion [T] Signal transduction mechanisms |
COG ID | [COG0538] Isocitrate dehydrogenases [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCA CGCCAAAAGG CGAAGCCATT CAAATCGTCA ACGGGCGCCT GCAAGTGCCC GATCACCCGA TTATTCCTTT CGTTGAAGGT GATGGTACCG GTCGCGATAT TTGGCGGGCC AGTGTGCGGG TCTTCGATGC TGCGGTGGCA CTGGCTTATG GTGGCAAGCG CAAAATCGAG TGGCTGGAAG TATTGGCCGG CGAAAAGGCC TTCCAACAGA CAGGCAACTG GCTACCAGAC GAGACCGTTG AGACGTTTCA GAAGTATCTG GTTGGCATCA AGGGACCGCT TACAACACCG GTTGGCGGTG GTATCCGTTC ACTCAACGTA GCGCTGCGTA AGCATCTCGA CCTGTATGTC TGTCAGCGAC CGGTACGGCA CTTTGCCGGT GTACCGTCGC CGGTGAAACA CCCCGAAAAG GTTGACATGG TCATCTTCCG TGAGAACACG GAGGATGTAT ACACCGGGAT TGAGTATCGT GGTGGTAGTC CAGAGGCGGC CAAAATTATC GAATTCTTAC AGCGCGAATT CCCGAAGGAT TTCGCGAAGA TTCGGTTTGG CACCCCTGAA CAGACCGACG AGTTTCGCCG TTTGATCGGT GAGGAACCAG AAGGTAAGAT CGAAGTCGGG ATTGGCATTA AGCCGATCAG CCGAATCGGT ACCGAGCGCA TCATGGCGGC GGCTATTCAA TACGCGATTA ATTACAAGCG GAAGAGCATT ACCATTATGC ACAAGGGGAA CATTCAGAAG TTCACCGAGG GGGCCTTCCG CGATTGGGCG TATGAATATG CCGAGCGAGC TTTCGGTGAT TATGTTTATA CGTGGGCACA GTGGGAGCGC ACGAAAGCGG CGCGTGGCGA AGCAGCAGCT AACGCTGAGC AGAAAGAGGC GCTGGCCAGC GGCAAGATTC TGGTCAAGGA CACGATCGCC GACATTATCT TCCAACAAGT GCTGACCCGG CCAGACGAAT TTGACGTTAT CGTCGCGCCA AACCTCAATG GCGACTACCT CTCGGATGCG TTGGCAGCGC AAGTCGGTGG GATCGGCATC GCACCCGGCG GAAACATCAA CTATGTGACC GGTCACGCCA TTTTCGAGGC GACCCATGGT ACGGCACCGA AGTATGCCGA TCTCGACAAG GTGAACCCCG GTTCGGTGAT TTTGTCGGGT GAGATGATGC TGCGCTATAT GGGTTGGACG GAAGCGGCTG ACCTTATTAT TGCCGGGCTT GAGCGCACGA TTGCCGACAA GACGGTGACG TATGACTTCG CCCGGTTGAT GGAAGGGGCA CGCGAGGTGA AAACCTCAGA GTTCGGTAGC TTGATCATTG CTAATATGGA GAAGATCGCT GCCGGACAGG TGCCGCACCC CGAAGAGACC TTTGGACCGG AGATTTTGCG CCGGGCCGAT GGCAAGGTTT ATCCGCACGA TAGCGTGGGG GCGGTGATGA CGCGGGCCGT GGTGGCCGTG CCGGCTGAGG CGTCGTTGCG CGAAACGGCG ATCTATATGC GTGGGCGCAA TATCCACTCG GTGATCGTTA AGCCGGATGC GAGTGGGCAG TGGGGCATTA TGACCATGCG CGACGTGTTG AAGAAGGTCG TGCGCGAGGG TCGAGCGGTT GATGGTTTGA CTGTCGGTGA TCTGACAACA CGGCCCCTAC TGAGTGTTAG CCCGGAGACT CCTATCACTG AGTGCGCTGC GCTGATGGTC GAGCGCAATA TTCGTCGGTT GGCGGTGGTT GAGAATGGGG AGCCAATCGG GATTATTTCG GAGACTGATA TTTTCAGCTA CGTGGCGGAG TAG
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Protein sequence | MNPTPKGEAI QIVNGRLQVP DHPIIPFVEG DGTGRDIWRA SVRVFDAAVA LAYGGKRKIE WLEVLAGEKA FQQTGNWLPD ETVETFQKYL VGIKGPLTTP VGGGIRSLNV ALRKHLDLYV CQRPVRHFAG VPSPVKHPEK VDMVIFRENT EDVYTGIEYR GGSPEAAKII EFLQREFPKD FAKIRFGTPE QTDEFRRLIG EEPEGKIEVG IGIKPISRIG TERIMAAAIQ YAINYKRKSI TIMHKGNIQK FTEGAFRDWA YEYAERAFGD YVYTWAQWER TKAARGEAAA NAEQKEALAS GKILVKDTIA DIIFQQVLTR PDEFDVIVAP NLNGDYLSDA LAAQVGGIGI APGGNINYVT GHAIFEATHG TAPKYADLDK VNPGSVILSG EMMLRYMGWT EAADLIIAGL ERTIADKTVT YDFARLMEGA REVKTSEFGS LIIANMEKIA AGQVPHPEET FGPEILRRAD GKVYPHDSVG AVMTRAVVAV PAEASLRETA IYMRGRNIHS VIVKPDASGQ WGIMTMRDVL KKVVREGRAV DGLTVGDLTT RPLLSVSPET PITECAALMV ERNIRRLAVV ENGEPIGIIS ETDIFSYVAE
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