| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1046 |
|---|
| Symbol | |
|---|
| ID | 7268418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1296583 |
|---|
| End bp | 1297818 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643565891 |
|---|
| Product | NADH dehydrogenase I, D subunit |
|---|
| Protein accession | YP_002462396 |
|---|
| Protein GI | 219847963 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC CGATCACGGT GCCGACGCCA CGGCAGATTA TCGAGCCGGC AGTGGCCGGT
CGCACCGAGA CGATGGTGCT GAATATGGGG CCGCATCATC CGAGTACCCA CGGTGTGTTG
CGGCTTGTGT TGGAACTTGA TGGCGAAGTG GTGGTGAATG TCGCTCCCGA TGTCGGCTAT
CTCCATACCG GCATCGAGAA GACGATGGAG AGCAAGACGT ACCAGAAGGC GGTGGTTCTG
ACCGACCGCA TGGATTATCT GGCTCCGCTC TCGAATAATC TCTGTTATGC ACTGGCCGTT
GAGAAGTTGC TCGGTATTGA GATACCTGAA CGTGCCCAGA TTGCCCGTGT CCTGCTCACC
GAGTTGCAGC GGATCGCTTC GCATTTGGTC TGGCTCGGTA CGCACGCCCT CGATCTCGCG
GCAATGAGTG TCTTCCTGTA CGCCTTCCGT GAGCGTGAGC AGATCCTCGA TATTTTCGAG
TTGGTCTCCG GCGCGCGTAT GATGACCAGC TATTTTCGGA TCGGTGGGCT GGCTTACGAT
CTACCCGCCG ATTTTATTCC TACCGTCGAG CAGTTCCTCG CCATTATGCC GTCGCGTATT
GATGAATACG AGGATTTACT GACGGCCAAC CCGCTCTGGC TCGAACGGAC GGTTGGGGTC
GGTGTCATTG ATGCCCAATC GGCAATTGCA CTTGGGCTGA CCGGCGCTAA TCTGCGCGCG
ACCGGTGTTG CTTACGATGT GCGTAAGGCA ATGCCCTACA GTGGCTACGA GACGTATTCG
TTTGAGATTC CGGTAGGCAA GAACGGCGAT ATATACGACC GCTATCGCGT GCGGGTCGCT
GAAATGCGCC AAAGTGTGAA GATTGTGCAG CAAGCAACTG AACGATTGCG CGAGTTGGGG
CCTGGTCCCG TGATAACTCC TGATCGTAAA GTTGCTCCAC CACCCAAGCG CGAGATTACC
GAGAGTATGG AGTCGCTCAT TCACCACTTT AAGCTTTGGA CCGAGGGCTT TAAGCCTCCA
CGGGGCGATG CCTACGTAAG CATCGAATCG CCCCGTGGCA TCCTCGGTTG CTATGTGGTG
AGTGATGGTA GTCCCAAGCC ATGGCGTGTC CATTTCCGCG CGCCGTCCTT CATCAATCTA
CAGAGTCTGG CTCATATGGC TAAGGGTCGG CTGGTTGCCG ATTTGGTCGC ATTGATCGCC
AGCCTCGATC CCGTCCTCGG TGAAGTGGAT CGCTGA
|
|---|
| Protein sequence | MTEPITVPTP RQIIEPAVAG RTETMVLNMG PHHPSTHGVL RLVLELDGEV VVNVAPDVGY
LHTGIEKTME SKTYQKAVVL TDRMDYLAPL SNNLCYALAV EKLLGIEIPE RAQIARVLLT
ELQRIASHLV WLGTHALDLA AMSVFLYAFR EREQILDIFE LVSGARMMTS YFRIGGLAYD
LPADFIPTVE QFLAIMPSRI DEYEDLLTAN PLWLERTVGV GVIDAQSAIA LGLTGANLRA
TGVAYDVRKA MPYSGYETYS FEIPVGKNGD IYDRYRVRVA EMRQSVKIVQ QATERLRELG
PGPVITPDRK VAPPPKREIT ESMESLIHHF KLWTEGFKPP RGDAYVSIES PRGILGCYVV
SDGSPKPWRV HFRAPSFINL QSLAHMAKGR LVADLVALIA SLDPVLGEVD R
|
|---|
| |