Gene Cagg_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0985 
Symbol 
ID7268357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1218330 
End bp1219745 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content57% 
IMG OID643565834 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_002462339 
Protein GI219847906 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.339538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.476467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAA AGGGGGTTAT TCAAGAGATT ATCGGCGTGG TCATCCGGGC CAAGTTCCCG 
GAAGATCAGG TGCCCGAGAT TTATAACGCT ATCGAAATTC CGCTCGAACA GGGTGGCCGC
CTGGTCTGCG AGGTACAGCA GCAGCTCGGT AATGGAGTAG TGAAGGCGGT TGCGATGGGT
TCGACCGACG GCTTGCGTCG TGGGCTTGAG GTGATCGATA CCGGTCGCCC GATTGCCGTG
CCGGTTGGGC CGGCAACGCT GGGACGGGTG TTTAATGTGT TGGGTGACCC GATTGATGGT
GGCCCACCCT TTGGGCCAGA GGTTGAACGG CGCCCCATCC ACCGAGATCC GCCGAGTTTT
GAAGAGCAGT CAACCCAAGC CCAGATCTTT GAAACCGGAA TTAAGGTGAT CGATCTGATC
GCACCGTTTA CCCGTGGTGG GAAGACGGCT ATCTTCGGTG GCGCCGGCGT TGGGAAGACG
GTGGTGATCC AGGAGCTGAT CGCGAATATC GCGAAAGAGC AGTCGGGCTT TTCGGTTTTT
GCCGGTGTAG GTGAACGCTC ACGCGAAGGG AATGACTTGA TCCACGAAAT GCGCGAGGCG
CGCATCGACG AGAATACTAC CGTCTTTGAC AAGACGATTA TGGTCTTCGG TCAGATGAAC
GAGCCACCCG GTGCTCGTCT GCGCGTCGGT CTGACGGCGT TGACTATGGC CGAGTATTTC
CGCGATCAAG GACGCGACAT CCTGCTCTTT ATTGATAATA TCTTCCGTTT TGTGCAGGCC
GGTTCTGAGG TGTCTTCGCT GCTGGGCCGT ATGCCGTCGC AGGTGGGGTA TCAGCCGACC
CTCGGTACCG AGATGGGTGA GTTGCAAGAG AGGATTACCT CGACCAAACG CGGTTCGATT
ACATCAATGC AGGCCGTGTA CGTGCCGGCT GACGACTATA CCGACCCCGC TCCGGCAACG
GTGTTTAGCC ACCTCGACGC AACCATCTCG CTCGAACGTA GCATTGCCGA GCGTGCAATC
TTCCCGGCAG TCGATCCACT CGCTTCCACA TCGCGTATTC TCGACCCGAA CATCGTCGGT
GAGGAGCATT ATCGGGTGGC GCAAGAGGTA AAGCGCGTCT TGCAGCGCTA CAAAGACCTC
AAGGATATTA TCGCCATTCT CGGTATGGAA GAGCTGAGCG ATGAAGATAA GCTGACGGTG
CAGCGTGCAC GTAAGATCGA GCTGTTCTTC TCGCAGCCGT TTACAGTGGC GCAGCAGTTT
ACCGGTCGCC CCGGTAAGTA TGTGCCGGTG AAGAAGACGG TTGAGAGTTT TGCCCGTTTG
CTGAACGGCG AAGGTGACCA TATTCCCGAG TCGTTCTTCT ACATGCAAGG TGATTTTGAC
GATGTCCTGG CCGCGTATGA GGCGAGCCAG AAGTAA
 
Protein sequence
MPAKGVIQEI IGVVIRAKFP EDQVPEIYNA IEIPLEQGGR LVCEVQQQLG NGVVKAVAMG 
STDGLRRGLE VIDTGRPIAV PVGPATLGRV FNVLGDPIDG GPPFGPEVER RPIHRDPPSF
EEQSTQAQIF ETGIKVIDLI APFTRGGKTA IFGGAGVGKT VVIQELIANI AKEQSGFSVF
AGVGERSREG NDLIHEMREA RIDENTTVFD KTIMVFGQMN EPPGARLRVG LTALTMAEYF
RDQGRDILLF IDNIFRFVQA GSEVSSLLGR MPSQVGYQPT LGTEMGELQE RITSTKRGSI
TSMQAVYVPA DDYTDPAPAT VFSHLDATIS LERSIAERAI FPAVDPLAST SRILDPNIVG
EEHYRVAQEV KRVLQRYKDL KDIIAILGME ELSDEDKLTV QRARKIELFF SQPFTVAQQF
TGRPGKYVPV KKTVESFARL LNGEGDHIPE SFFYMQGDFD DVLAAYEASQ K