Gene Cagg_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0931 
Symbol 
ID7268004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1159740 
End bp1160264 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content57% 
IMG OID643565779 
ProductHNH endonuclease 
Protein accessionYP_002462285 
Protein GI219847852 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.432363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGGG GGTGTCACTT GGCACAGCGA GTCCTCGTTC TTAACGCAAG TTACGAGCCA 
CTGCAACTGA TTTCGGTACG GCGTGCGCTC ATCCTCCTCC TGCAGGAAAA GGCCGAGTTA
GTCGAAGCTG CCATGCAGCA GCTACGTGCT CAATCGGTGA CGTACAGTGT ACCTCTGGTG
ATCCGTTTGG TACGCTACAT CCGGATTCCG CGCCAACTGC GCTTACCCTG CTCGCGGCGT
GGTGTGTTTG CCCGCGATCG TGAGACATGC CAATATTGTG GCAAACAGCC GGGGCGAGCG
TATTTGACGA TGGATCACGT CATCCCGCGC TCACAAGGTG GGCAAACCAC ATGGGAGAAT
GTCGTAACGG CTTGTCGTGA TTGCAACCAC CGTAAAGGTG GGCGAACGCC CGAACAGGCG
AATATGGTGC TCCTCTCAAC GCCGCGCCAA CCGCAGTATC TGGCCTTTGC CCTACTCGGC
GAGCTTGAGC GGCATGATGT CTGGCGCAAA TATGCCTACA CCTAA
 
Protein sequence
MLRGCHLAQR VLVLNASYEP LQLISVRRAL ILLLQEKAEL VEAAMQQLRA QSVTYSVPLV 
IRLVRYIRIP RQLRLPCSRR GVFARDRETC QYCGKQPGRA YLTMDHVIPR SQGGQTTWEN
VVTACRDCNH RKGGRTPEQA NMVLLSTPRQ PQYLAFALLG ELERHDVWRK YAYT