Gene Cagg_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0904 
Symbol 
ID7267977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1132583 
End bp1133305 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID643565752 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462258 
Protein GI219847825 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000369961 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000003868 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACTCA ACGGCACGCA TGCCTTTGTA ACCGGCGGTG GACGAGGCTT AGGTCGCGCC 
AGCGCACTAG CACTGGCCCG CGCCGGCGCT GCGGTCACGG TCATCGCGCG CAGTGCCGAT
GAAGTCGCCG AAACCGCCTG GCTGATCGAA GAGAGCGGAC AACAAGGATT AGGATTAACC
GCCGATGTCC GTGACAGTTA TCAGCTTGAA CAGGACGTCG CCCAAGCCCG TGCTCGTTTT
GGTCACATCC ACGTCTTGGT CGCAGCCGCT GGCGTCGGTC TGCGCGCACC GATCTATGAA
ACAAGTGAAA CTCAATGGGA CGAAGTGGTC GATACATTGC TCAAAGGTGT TTTTCTCAGC
GCACGCGCCG TGATCCCTCA CATGATCGAG GCAGGTGGCG GTAACATCAT TATCATCGGG
GCACCACTCG AACGGATTGC CGTGCCCGGT TTTGCCGCCT ACTACGCCGC TAAAGCAGGT
GTCGACGGCT TAGCACGGGT GATGGCCAAG GATCTGCGCC GTTTTGGCAT TAACGTTAAT
CTTGTCCATC CCGGCGGTTT CGCCGATACC CATCTGGTAC GCACGACCGT GCCCGAAGTA
CGGACCGGCT TGCTCAGCCC CGATGAGATC GGCCCAACGA TTGTCGAACT CGCTGCGCTG
CCACCGCGGA GCCAGACCGG CCAGACGATT GATGCCCATG CACGCAAATT GATGTCAAAT
TAG
 
Protein sequence
MTLNGTHAFV TGGGRGLGRA SALALARAGA AVTVIARSAD EVAETAWLIE ESGQQGLGLT 
ADVRDSYQLE QDVAQARARF GHIHVLVAAA GVGLRAPIYE TSETQWDEVV DTLLKGVFLS
ARAVIPHMIE AGGGNIIIIG APLERIAVPG FAAYYAAKAG VDGLARVMAK DLRRFGINVN
LVHPGGFADT HLVRTTVPEV RTGLLSPDEI GPTIVELAAL PPRSQTGQTI DAHARKLMSN