Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0904 |
Symbol | |
ID | 7267977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1132583 |
End bp | 1133305 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565752 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002462258 |
Protein GI | 219847825 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000369961 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000003868 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACTCA ACGGCACGCA TGCCTTTGTA ACCGGCGGTG GACGAGGCTT AGGTCGCGCC AGCGCACTAG CACTGGCCCG CGCCGGCGCT GCGGTCACGG TCATCGCGCG CAGTGCCGAT GAAGTCGCCG AAACCGCCTG GCTGATCGAA GAGAGCGGAC AACAAGGATT AGGATTAACC GCCGATGTCC GTGACAGTTA TCAGCTTGAA CAGGACGTCG CCCAAGCCCG TGCTCGTTTT GGTCACATCC ACGTCTTGGT CGCAGCCGCT GGCGTCGGTC TGCGCGCACC GATCTATGAA ACAAGTGAAA CTCAATGGGA CGAAGTGGTC GATACATTGC TCAAAGGTGT TTTTCTCAGC GCACGCGCCG TGATCCCTCA CATGATCGAG GCAGGTGGCG GTAACATCAT TATCATCGGG GCACCACTCG AACGGATTGC CGTGCCCGGT TTTGCCGCCT ACTACGCCGC TAAAGCAGGT GTCGACGGCT TAGCACGGGT GATGGCCAAG GATCTGCGCC GTTTTGGCAT TAACGTTAAT CTTGTCCATC CCGGCGGTTT CGCCGATACC CATCTGGTAC GCACGACCGT GCCCGAAGTA CGGACCGGCT TGCTCAGCCC CGATGAGATC GGCCCAACGA TTGTCGAACT CGCTGCGCTG CCACCGCGGA GCCAGACCGG CCAGACGATT GATGCCCATG CACGCAAATT GATGTCAAAT TAG
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Protein sequence | MTLNGTHAFV TGGGRGLGRA SALALARAGA AVTVIARSAD EVAETAWLIE ESGQQGLGLT ADVRDSYQLE QDVAQARARF GHIHVLVAAA GVGLRAPIYE TSETQWDEVV DTLLKGVFLS ARAVIPHMIE AGGGNIIIIG APLERIAVPG FAAYYAAKAG VDGLARVMAK DLRRFGINVN LVHPGGFADT HLVRTTVPEV RTGLLSPDEI GPTIVELAAL PPRSQTGQTI DAHARKLMSN
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