Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0861 |
Symbol | |
ID | 7268312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1071046 |
End bp | 1072200 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565707 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002462216 |
Protein GI | 219847783 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.339041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.260174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGAGT TGTTTGCCGC CTTTGCGCAC GCGCCACACG CTGTATTTTG GCTTAGTGCT GAGGGGCGTA TCGTCGATTG CAATGCGGCT GCGGCAACAC GGTTTGGGTT GACGCCTGCC GATCTGCGTG GGCGGTTGTT TGCAACCCTA CTCGATCCGT TTAGTATTGC TAAGGCGCAG ACGATGATCG AGCAGACGCT GCGGGAAGGT GGCGTACAGC ATTGGGAGCT TGATCATCTG CGGGTTGGGG AGCCGCCGTT TTTGCTCGGC TACACGACGT GGCTGTTACG CGATGAGGCT GGCGCCGTTT GTGGTGTGAT CGCGTTGGGT CTCGATCTCG GTTTGGCAAT GACGCTTGCA GCGCAACTCG CGGCAGCGAA TCAGCAATTA GAAGCAACGT TAAAGCAACT GGAACACGCC CATGCCGAAC TCAAAGCGGC GCAGACCCAA CTGGTGCAGT CTGAGAAGAT GCGGTCGCTT GGTCAATTGG TGGCCGGTGT CGCGCACGAG ATTAATACGC CGTTGGGGTA TGTGGCGAAT AATCTGGCGT TTCTGGCCGA GCGGTTGCCG GCGTTGCGCG CTGCTCCTAC CGACGAGCTG GGTTGGCGCG ATGTGACCGA TGCGATTCGC GAGAGTCAAA CCGGTATCGA ACGGATTGCC GCCATTGTGC GTGCTTTGCG GGTGTTTGCT CGTCCCGATG AAGATAGTTT GGTGCCGGCT GACGTAAATG AGGGTTTGGC AAGTACCGTG CGTATGGTGC GCGCGGTCAG CGGCCCACGT GTTACAATTC ACGAGGAGTA TGCTCAGGTG CCCCGCGTGC TTTGCCATCC CGGTGAGTTG AATCAGGTGT TTCTCAATCT TCTGCTGAAC GCAGTGCATG CGTGTCGCGG CACCGGCACC GTGATCGCGC AAACGATGAG TGATGGAACC TCAATTACGG TAACGATTCG CGATACCGGG ATCGGGATGG ATGCGGCGAC GCTGGCCCGG CTAGGAGAGC CGTTTTTTAC TACGTGGCCC GATGGCGAAG GGACGGGTTT GGGATTGGCG ATCTCGCGCG AGATTGTTGC GCGCCACGGT GGTCAGCTCC GGTTTCAGAG CGAACCGGGT CGTGGCACGA CAGTTGAGGT GATTTTGCCG GTGGGAACGC TCTAA
|
Protein sequence | MNELFAAFAH APHAVFWLSA EGRIVDCNAA AATRFGLTPA DLRGRLFATL LDPFSIAKAQ TMIEQTLREG GVQHWELDHL RVGEPPFLLG YTTWLLRDEA GAVCGVIALG LDLGLAMTLA AQLAAANQQL EATLKQLEHA HAELKAAQTQ LVQSEKMRSL GQLVAGVAHE INTPLGYVAN NLAFLAERLP ALRAAPTDEL GWRDVTDAIR ESQTGIERIA AIVRALRVFA RPDEDSLVPA DVNEGLASTV RMVRAVSGPR VTIHEEYAQV PRVLCHPGEL NQVFLNLLLN AVHACRGTGT VIAQTMSDGT SITVTIRDTG IGMDAATLAR LGEPFFTTWP DGEGTGLGLA ISREIVARHG GQLRFQSEPG RGTTVEVILP VGTL
|
| |