Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0732 |
Symbol | |
ID | 7268051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 909694 |
End bp | 910932 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643565583 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002462092 |
Protein GI | 219847659 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000169813 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACGA GCACTGCCCT CAGCTCATCT CGTCATCGCG CAGCAATATT CCGGGCTTTA CGCCATCGAA ATTATCGCCT CTTCTTCATC GGACAACTGA TCTCACTGAC CGGGACGTGG ATGCAGAGTG TTGCGCAGGG CTGGCTGGTA CTCCGTCTTT CCGATTCGCC GTTCTTGCTC GGTGCAGCGG CAGCGGCCAA CTCGCTGCCG GTATTGTTGT TATCACTTTT TGCCGGTACG ATAGCCGATC GTTTTCCAAA ACGCCGCATT TTACTAATCA CCCAATCGAC GGCGATGGTG TTGGCGGCGA TATTGGCCTT CCTAACGTTC AGTAGTGTTG TACAAATTTG GCATGTGTTG ATCCTGGCAC TCCTGTTAGG GGTCGTCAAT GCGTTTGATG CACCGGCCCG ACAGGCCTTT ACCGTTGAGA TGGTGGGGCG CGAAGATCTG CTCAATGCTA TCGCTCTCAA TTCGTCAATC TTCAATGGGG CGCGCACCGT CGGGCCGGCG TTGGCCGGTA TGGTAGTAGC CTGGATCGGT GAAGGACCCG CATTCCTGTT TAATGCCTTA AGCTTTGGGG CCGTTCTGAC CAGCCTCTTA CTGATGCGTC TTGATACGCA GTTGCACCGC GGATCGCAGC GGGGTGGGAT GTTACGCGCC GGATTGGCGT ATATTGCCGG TGAACCACAT GTACGCGCCC TGTTATTACG GGCCGGCGCC GTTAGTTTCT TCTGTTTCGT TCATATTCCG CTTTTGCCAA TATTTGCCCG TGATATTCTT CAGATCGGAG CTACGGGTCT TGGATGGCTA TCGGCAGCCA GTGGTTGTGG TTCGCTGGTC GCAGCACTCA TCCTCGCCCA ACTCCGCGAT GATGCACCGC GCGGTAAGTT GCTATCAATC GCAGCCACAA TGTATGCACC TCTCCTTATT ATGTTCACCC AAGTTCGTAG CCTGTCGTTC GCTTTGCTCT TCATCGGTCT CTGCGGCTGG GCCGGGGTCA CCACGATGGC GCTCACCAAC ACGCTGATTC AGCTTACCGT ACCCGATGAA TTGCGTGGAA GGGTTATGAG CGTCTTTACG CTGCTTTTGA TGGGACTTAG CCCCTTGGGC GGTATGCTGG CCGGCAGTAT CGCCGAACTG GTTGGAAGTG TACCCACAGT CATAGCCGGC AGTGCTGTCA TCGGCTGGCT ACTCGTGCTG CTCGTCGAAT GGCAAACACC GCAATTACGC CGGTTATGA
|
Protein sequence | MSTSTALSSS RHRAAIFRAL RHRNYRLFFI GQLISLTGTW MQSVAQGWLV LRLSDSPFLL GAAAAANSLP VLLLSLFAGT IADRFPKRRI LLITQSTAMV LAAILAFLTF SSVVQIWHVL ILALLLGVVN AFDAPARQAF TVEMVGREDL LNAIALNSSI FNGARTVGPA LAGMVVAWIG EGPAFLFNAL SFGAVLTSLL LMRLDTQLHR GSQRGGMLRA GLAYIAGEPH VRALLLRAGA VSFFCFVHIP LLPIFARDIL QIGATGLGWL SAASGCGSLV AALILAQLRD DAPRGKLLSI AATMYAPLLI MFTQVRSLSF ALLFIGLCGW AGVTTMALTN TLIQLTVPDE LRGRVMSVFT LLLMGLSPLG GMLAGSIAEL VGSVPTVIAG SAVIGWLLVL LVEWQTPQLR RL
|
| |