Gene Cagg_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0570 
Symbol 
ID7266042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp706330 
End bp707079 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content53% 
IMG OID643565433 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002461945 
Protein GI219847512 
COG category[L] Replication, recombination and repair 
COG ID[COG1688] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01895] CRISPR-associated protein Cas5, Tneap subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.519199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCC TCAAAATCGT GCTCGAAGGG ATCACCACCT CATTCCGCTA CCCGCATTTT 
ATGCTGGGGG TCCAGCCGAC GTTTCCCTTA CCGCCACCGG CGACCATCTA TGGTCATATA
TGTAGTGCGC TTGGTGAGTG GTTTGATCCA GACGGAGTAA TGTTTGCCTA CCATTTCACG
TTTGCCGGTG AAGGTCAAGA CCTCGAACAT ATTCACGTGC TGTCGGTATC GTCGGGCAAA
TTACCCGGCG GTGAACGGAA AGTCCTCGAG GGCAACGTCA ATCCCTTCAA ACGCAATATA
CTCCTCTTTC CGCGGTTGAC GCTCTACCTC AACCGGCCTG ACTGGATCGA TTATTTTCGT
CGTCCGCGTT ACCCGGTTGT TTTGGGCCGT TCGCAAGACT TGGCCGTATA CACGCAGATC
GAGGTGATTG AGCTGCAACA GCAAGCACAG GTCTACTTTG AACATACGCT CCTACCGTAT
ACCATGGCAA TCCAAATACC GGCCGGGGTT GTCGCTCTTA TGCCGAGCTG GATTGACTAC
CGTAATCGGC GACGGCCGAT CTTTGCCCGC TATCTGATGC TTACCGAGCG GGTGATGAGC
AAGCAGATGC TACACTTCGG TTCACAAAAG CCGCGTTATT GGTATGATCC GACCGCACCA
CGGATACATG ACGAACCGTT AGGGTTAGTA TTCCACACCT TCGGAGGAAC TGCCGATGAA
TCCTTCACCG TGGCCTCATT GGATAGATAA
 
Protein sequence
MRVLKIVLEG ITTSFRYPHF MLGVQPTFPL PPPATIYGHI CSALGEWFDP DGVMFAYHFT 
FAGEGQDLEH IHVLSVSSGK LPGGERKVLE GNVNPFKRNI LLFPRLTLYL NRPDWIDYFR
RPRYPVVLGR SQDLAVYTQI EVIELQQQAQ VYFEHTLLPY TMAIQIPAGV VALMPSWIDY
RNRRRPIFAR YLMLTERVMS KQMLHFGSQK PRYWYDPTAP RIHDEPLGLV FHTFGGTADE
SFTVASLDR