Gene Cagg_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0522 
Symbol 
ID7267019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp643507 
End bp644370 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID643565385 
ProductABC transporter related 
Protein accessionYP_002461897 
Protein GI219847464 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000861338 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC CTGCAATTAT CGCTGAAGAG CTGGTGTATC GCTACGGTGA CTTGCTCGCC 
GTCGATCACA TCAGCTTTAC CGTCGAACGT GGTGAAATCC TCGGGTTTCT TGGCCCCAAC
GGTGCCGGTA AATCGACGAC CGTCAAGATG CTGACCGGCC AACTTCGCCC TGTTAGCGGG
CGTGCATTGT TGCTAGGAAT TGATGTGGCT CGCCACCCAA AACAGGTGCA AGCGCGGATT
GGGGTATGCT TCGAGCAGCC CAATCTCTAC GAAGAGTTGA GCGGGGTTGA AAATCTCCAG
TTATTTGCCC GTCTCTTTGG CGTGCGTGAT GTCGATCTGC AAGGATTACT GCGCCGAGTC
GGTCTGGATG GTCGCGGTAC CGATCTCGTT GGACGCTATT CCAAGGGCAT GAAACAGCGC
CTCATGATCG CGCGCGCATT GGTGAATCGC CCCGATATTC TCTTTCTCGA TGAACCAACC
GAGGGTCTTG ATCCAACCTC TGCCGAGGCA ATTCGGCGGG TGATTGTCGA AGAGCAGCAA
CGGGGGGCAA CCATCTTTCT CACCACCCAC GATATGTACG AGGCCGACCG TCTGTGTCAT
CGGGTTGCGT TTATCAATAG CGGCAAGATT GTCGCACTTG ATACTCCGCA TAACCTGAAG
CAACAGTACG GTAAACGAAT GGTGCGTGCC GAACTCGTTG GTCCCGATGG GACGTTATAT
ACCCGTGAGA TTGTACTCGA CCGCCCTGAG ACGCCGACTG AGCTTGCCGA TTTGCTGGCC
CATGAGCACG TGGTGACATT GCATAGCGAA GAGGCAACCC TCGAAGATAT TTTTATTCGC
TTAACCGGTC GCGGCTTGGC GTGA
 
Protein sequence
MSEPAIIAEE LVYRYGDLLA VDHISFTVER GEILGFLGPN GAGKSTTVKM LTGQLRPVSG 
RALLLGIDVA RHPKQVQARI GVCFEQPNLY EELSGVENLQ LFARLFGVRD VDLQGLLRRV
GLDGRGTDLV GRYSKGMKQR LMIARALVNR PDILFLDEPT EGLDPTSAEA IRRVIVEEQQ
RGATIFLTTH DMYEADRLCH RVAFINSGKI VALDTPHNLK QQYGKRMVRA ELVGPDGTLY
TREIVLDRPE TPTELADLLA HEHVVTLHSE EATLEDIFIR LTGRGLA