Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0435 |
Symbol | |
ID | 7266603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 539419 |
End bp | 540459 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565302 |
Product | isopentenyl pyrophosphate isomerase |
Protein accession | YP_002461816 |
Protein GI | 219847383 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.949256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTG ACGACAGAAC TGAATCGCGT AAAGTAGATC ACATCCGAAT CGTGCTCAAC GAAGATGTTG CTGCCAAGGG TGTCGTTACC GGTTTTGCCG CCTACCGTCT ACCTCACCGC GCGTTACCCG AACTCGATCT CAATGAGGTT GATACACGCA CCACCTTTCT CGGCAAACCT ATCGCTGCAC CATTGCTGAT CAGTTCAATG ACCGGTGGCA CAGCGAGTGC CGAGAAGATC AATTTGACGC TGGCCGAGGC TGCTGAGTAT CTCGGCCTGC CGATGGGGGT TGGCTCACAG CGGGCTGCAG TGATGGATCC GCGTCTTGCG AGTACCTATC AGGTGCGTCG CGTTGCGCCA CGGATTCCGC TCTTGGCGAA CGTCGGTGCT GTCCAACTCA ATTACGGCTT TACCGTCGAT CATTGCCGAC GGGCGGTTGA GATGATCGAG GCTGATGCGT TGATTTTGCA TTTGAACCCG CTCCAAGAAG CCGTACAACC TGAAGGTGAT GTGAATTTTA AAGGCTTATT GAACAAGATC GAAGAGGTCT GTCGTCGCCT TGAAGTACCG GTTGTCGTCA AAGAGGTTGG GAACGGGATC GGTGCGGCTG ACGCGATCCG GCTATACGAA GTCGGAGTAC GCATCATCGA TGTCGCCGGT GCCGGTGGTA CGAGCTGGAG TGAAGTCGAA CGCTTCCGCC AACCCAACGA TACCGGGCGG CGGGTGGCCA GTGCATTCGC CGATTGGGGT TTGCCGACGA CCGAATGCGT GCGTGAGGTG CGCGCGGCGT TACCCGATGT CACGCTCATC GCTTCAGGTG GCGTGCGGAG TGGTGTTGAT GTGGCGAAGG CCATTGCGTT AGGGGCCGAT CTGGCCGGAA CGGCGCGGCC CGCCCTCTTT GATGCGATCA ACGAACGTGG TGCTGAGGCG GTGATCGAGG GGTTGAGCGC ATTCATTCGT GAGTTGCGGG TGGCGATGTT TTGCAGCGGT TGCGCGAACT TGAGCGAGTT ACGAAATCTC CGTCTCGGTA TGCGCCCGTA A
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Protein sequence | MPGDDRTESR KVDHIRIVLN EDVAAKGVVT GFAAYRLPHR ALPELDLNEV DTRTTFLGKP IAAPLLISSM TGGTASAEKI NLTLAEAAEY LGLPMGVGSQ RAAVMDPRLA STYQVRRVAP RIPLLANVGA VQLNYGFTVD HCRRAVEMIE ADALILHLNP LQEAVQPEGD VNFKGLLNKI EEVCRRLEVP VVVKEVGNGI GAADAIRLYE VGVRIIDVAG AGGTSWSEVE RFRQPNDTGR RVASAFADWG LPTTECVREV RAALPDVTLI ASGGVRSGVD VAKAIALGAD LAGTARPALF DAINERGAEA VIEGLSAFIR ELRVAMFCSG CANLSELRNL RLGMRP
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