Gene Cagg_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0424 
Symbol 
ID7266592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp525656 
End bp526981 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content53% 
IMG OID643565291 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002461805 
Protein GI219847372 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC CGGCGCGGAT CCTGGTTGCC GAAGATGAAG CAGATGTAGG GAAGCTTCTA 
CACGACATAC TCACCGGCGC AGGGTACGAG GTCGAACTCG TTCCCAACGG TGATCAGCTC
GTGCGACGCG CTCAGGCACA GCCACCGGAT CTGATCATCG CTGATTTACT CATGCCGCTG
ATAGACGGTC TAGAGGCGAT TCGCCAGTTA CGCAACGATA CACGCACTGC CCATTTGCCA
ATGCTCATAC TTACCGCCAT TGGCGATTCA TCCCGTATCG TTGAAGGCTT TGAGAACGGT
GCAGATGACT ATATCACCAA ACCGTACAAT CGCGATGAGC TGTTGGCCCG CGTCCGATCG
CATTTACGGC GGGCTGCTCA GTTGCCCCAG CGCAACCCAC TGACCGGCTT GCCCGGCAAT
GTCGTCATTC AAGCCGAGAT CAATCGCCAA CTTGCTCAGC AAGCCACGTT TGCGTTGCTG
TATATTGACC TCGACAACTT TAAGGCATTT AACGATGTCT ACGGCTTCGC GCGTGGCGAT
CGTGCCATCC ATCTTTTGGC CGACATTTTG CGAGATCAGA TCAAACCCGG TGATTTTCTC
GGTCACATTG GTGGTGATGA TTTCGTCGTT CTCCACTTTG GTCCGGATGT GGAGTCATTA
TGTCAGCAGA TCATTCGCGT GTTCGATGAG CAGATTCGTT CGTTATACGA TGAGGCTGAC
CTACAGCGCG GTTATTTGCT CGCAACCGAT CGGTATGGTG TCCAGCGTCA GTTTGGTATT
ATCAGCCTTT CGATTGCCGT CGTAACGACG TATCATCGCA CATTTACCGA TGTTGATGAA
ATGAGCCGAG TTGCAGCCGA GTTAAAGAAG GCTGCCAAAC AAATTGCCGG CAGTAGTTAC
AAAATTGATC GGCGTAGTGA TGGGCGTTGT GATGATGGCA TGGCGCCTGT GCCAACCGAA
CGGCGTACCG GTCGTTCGCC CGATGCGCTC ATCATATGTC AGGATGCGGT TGCGCGTGCG
GCTATTGTTG CGACACTGAA CGTGCGTGGC TACTGTCTCT TTATCGCCGA TAACGAAATT
GCTGCACAGG GATTGTTGGC AAATGAGCCA CAGCCAGAAT TGGTGGTGGC AGAATTGTTC
GATCTCAAAA CACTCACCCT GTGGCGCCAG ATTAATCACG ATACACCACT TATTGCCCTG
GCTCGCAACG AGCAAGAGGT CATAGACGCC CGCGCTGCCG GCGCCACAAC GGTGATCTGG
TTAAACAATA ATCCGCTCGA TCTTTCAGAC CAGTTGCAAA CCGCACTGGA TACGCTCAGC
TTGTAA
 
Protein sequence
MTAPARILVA EDEADVGKLL HDILTGAGYE VELVPNGDQL VRRAQAQPPD LIIADLLMPL 
IDGLEAIRQL RNDTRTAHLP MLILTAIGDS SRIVEGFENG ADDYITKPYN RDELLARVRS
HLRRAAQLPQ RNPLTGLPGN VVIQAEINRQ LAQQATFALL YIDLDNFKAF NDVYGFARGD
RAIHLLADIL RDQIKPGDFL GHIGGDDFVV LHFGPDVESL CQQIIRVFDE QIRSLYDEAD
LQRGYLLATD RYGVQRQFGI ISLSIAVVTT YHRTFTDVDE MSRVAAELKK AAKQIAGSSY
KIDRRSDGRC DDGMAPVPTE RRTGRSPDAL IICQDAVARA AIVATLNVRG YCLFIADNEI
AAQGLLANEP QPELVVAELF DLKTLTLWRQ INHDTPLIAL ARNEQEVIDA RAAGATTVIW
LNNNPLDLSD QLQTALDTLS L