Gene Cagg_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0409 
Symbol 
ID7266577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp506816 
End bp508375 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content55% 
IMG OID643565276 
Producthypothetical protein 
Protein accessionYP_002461790 
Protein GI219847357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.241888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCA GACTTCTTCT CAGCCTGCTA CTTTGCTTGA GCATAACACC GGTAGCCTTG 
ATCCACGCGG CTCCGTCGGT TACAACGCCT GAATTTGCTC CACCGCCGAA TGATGTGCTG
ATCGCACCGC CACCAGCCAC CCTTGCCTTT GCCACCGACG AAGATCTCCG CCTACCGAGC
CAGTACCTCG CCGGTCGGGT GGCCGTGCGG TTGGTGTTGC CTGAAAGCAA TGGGCTGATC
GATCCGTCAG ATGAGGATTG GACGCCTGAT CAGATCGAGC AGGTTGTAAG CGAAACGCAA
GCCGCTCTCG ACTGGTGGCG CGATCGATTG CCTGCTGCCC GGCTAGCGTT TGACCTGGTT
GTTCAGACGG CGCCGACCAA CTATGAACCG ATTCACCATG GCATTGCGCA AGAAGGTCTC
TGGATTGGTG ACGTGTTGCA GAAACTGGGC TACAACGGTG GTAACTATAT TGAGCAAGCG
TACCGTGTTG CGTTTGATCT GCGCGATCAG CGTAGTGCTG ATTGGGCGAC GACAATATTT
ATTGTCAATA GTGCCCGCGA TGATGGCTAC TTTGCCGATG GTCGCTTTGC CTATGCCTAC
CTCAACGGCC CATTGAGCGT CATCACATCC GATGGTGGGC CGTACACGAC TCGGTGGCTG
CGTGCCGTTA TCGCCCACGA ATTTGCCCAT CTCTTCGGCG CACTCGGTCA GTATAGTGCG
GCAGGTGTGA GCTGCGATCA GCGGAGTGGC TATCTGTTTG CACCGACGAC CAACAGTATG
TTCAACAATT GCGGTACTGA CGAGCCTAGC ATTATGCGTG AACTGATCAA CAGCTTTACT
ATCGGTGCGG TTGACGCATC GGCGCGGGCG CAGCTTGGTT ATCGTGATAG CGATGGTGAT
GGCGTGATTG ATGTACTCGA TACGACGCCG ACGATCACGC TTACCGCTAC TGGGCAAACG
CTCAGCCATC GTCCGGTGGT AGAGTTGATG GTTCGTGATC TGGGTTATCC CTCGCCGGTA
CAGCCTGACG TCAGCATTAA TCCGATCCGG TCGGTAGAGT ATCGGGTTGG AGACAGTGAT
TGGCAGCTTG CGCTACCGGT TGATGGTACG TTTGACCAAA CCCGCGAGAT TGTTCACGTC
GAATTACCGC TGTACGACGG TGAGTATGTC GTTGAGTTTC GCGCTGTTAA TCTGGTAGGC
AACGTCTCAG ACCCGATCAC ACAGACGTTC ACAGTTAGTG GTTTAGGTGT GGCGCCGGCC
TATCGGCTAG AGCCGGCATC CATTGAAAAT CGAACGCTGG TGATCCACGT CCAAGCACCA
CCGGAGACAC AACTTGTCGA AGTGAGCACA CGTCGCGACT TTGCCAATCC GTGGCGTCTA
CCCTACCGCT CCGAAATTGC TCTGCCGTTA CCCAATGAGT TGGCACTGAC CACATTCACC
AATGCGTCGG TGCTGTATGT GCGCTTTATC GATGCGGCCG GTTTACCATC GTTGGTCTAC
TCGTTACCTA TCAATGTGCC AGAACCGGTG ACGGTGCTGA TCCCGTTAAT TCTACGGTAG
 
Protein sequence
MHTRLLLSLL LCLSITPVAL IHAAPSVTTP EFAPPPNDVL IAPPPATLAF ATDEDLRLPS 
QYLAGRVAVR LVLPESNGLI DPSDEDWTPD QIEQVVSETQ AALDWWRDRL PAARLAFDLV
VQTAPTNYEP IHHGIAQEGL WIGDVLQKLG YNGGNYIEQA YRVAFDLRDQ RSADWATTIF
IVNSARDDGY FADGRFAYAY LNGPLSVITS DGGPYTTRWL RAVIAHEFAH LFGALGQYSA
AGVSCDQRSG YLFAPTTNSM FNNCGTDEPS IMRELINSFT IGAVDASARA QLGYRDSDGD
GVIDVLDTTP TITLTATGQT LSHRPVVELM VRDLGYPSPV QPDVSINPIR SVEYRVGDSD
WQLALPVDGT FDQTREIVHV ELPLYDGEYV VEFRAVNLVG NVSDPITQTF TVSGLGVAPA
YRLEPASIEN RTLVIHVQAP PETQLVEVST RRDFANPWRL PYRSEIALPL PNELALTTFT
NASVLYVRFI DAAGLPSLVY SLPINVPEPV TVLIPLILR