Gene Cagg_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0399 
Symbol 
ID7268500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp491405 
End bp494206 
Gene Length2802 bp 
Protein Length933 aa 
Translation table11 
GC content57% 
IMG OID643565266 
ProductPhosphoenolpyruvate carboxylase 
Protein accessionYP_002461780 
Protein GI219847347 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.917347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.991386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC GAACTACTGC TGGAGAACAC GATCTGTTGT CGGCAAACAT TCGAACGCTG 
GGCGATATGC TGGGTCGGGT TATCACCGAG CAAAGCGGCG CCGCAACGTT TGAACTGGTC
GAACGGGTGC GCTTGATGGC AAAAGAACTA CGCAACGGCG CTCCACCAGC GGGTACGCAC
GTGTTGCAAG ACCTCATTAC CGGGCTGAGC TTACCCCAAT TGCGCAACCT GGTCAAAGCG
TTTACCCTGT ACTTCGGGTT GGTCAATCTG GCCGAAGGTG TTGAACAATT GCGTGTCCTG
CGCAGTCGCG ACCTCCGTAA TGCACCGGCC CCTCGCGCCG AGAGTATTGC GGACGCGATT
GAGCTGCTGA AACGCCACGG AGTACCGGCT GCCGCGATCC AAGAGTGGAT CGACCAGGCC
CTGATTATGC CGGTATTTAC CGCTCACCCT ACCGAATCAC GCCGACGAAC CATCCTGATC
AAATTACGCC GGATTTTTGA TACGTTGATT GATTTGACCT TTGGTGAACG GTTGGTCCTT
CCATCGGATC GCCAATCGGC ACTCACTCGT ATCGAACGCG AAACGGTTGG TCTGTGGCAG
ACCGACGATG TACGCAACCG CCGGCCATCG GTCCTTGATG AAGTCGAAAA CGGTCTGTTC
TATTTTCAAA CTGTACTCTG GGATTTGATC CCGGAGATTT ATCGCGAAAC TGCCGATGCA
CTGGCGACAG CATACCCCGA CCACCGATGG CGACTACCAC CGTTCTTGCG ATTCGGGAGC
TGGATGGGTG GCGACCGTGA TGGTAATCCT TTCGTGACAC CCGAAGTGAC GGTTGAAACG
GTGCGCTTGA TGCGTAGCGC GATGTTACGC TATCTGATCA ACGGTATTGA TCGTTTGATC
ACCGATCTAA GTCAGTCGGT ACAACAGGTA CCGGTCGATC AGGCCATATT TGACCGGATC
GCCGAATATC ACGAGCTGAT GCCAGATGCG GCTGCTACGC TTAACCCCCA CTACCGCTGC
GAGCCGTACC GGCAATTATG TCACTTCATT CAGGCCCGGC TCCAAAACAC TCTCCATTAC
ACACTTAGTC ATACGCCGCG CTGGGGGGCC GATCCACCAC CGCCACGCCT ACCAACTATC
TACTACCACA GTCGCGAACT CCTCGCCGAT CTTGATCTGA TCGATACCAG CCTTCGTCGT
CACGGCGGGG CTATTATTGC CGACGGTCTG CTGCGCGATC TGCGTACAAA CGTGGCCGTA
TGCCGGCTCC ACACTGCAAC CCTTGACGTG CGCCAACACG CAAGCCGCCA TACCGAAGCA
CTCACCGAGA TCCTTGCCGG CGCCGGCGTA GTCGCCAACT ATGCTGCACT TGATGAATGT
GAGCGCGTTG CTGTGTTGAG CACCGAGATT CGCCGGCCCC GCCCGCTTAC TCCGATCCGA
CTCGGTCATT TCAGTCCGGC TACCGCCGAG ACGGTACAGA CATTTCGGAT GCTGGCAGCT
ATTAGCGAGC AACTCGATCC AGAAATCTTC CAGACCTATA TCATTTCAAC CACCAGCCAG
GTGAGCGATC TGCTGGCCGT CTTGCTCTTT TGCCGCGATG CCGGTCTGTA CCAACCCGGC
CAGTACAGCC GGTTGGATAT TGTGCCACTG TTCGAGACAG GCGAAGATTT GCAACGTGCG
CCATTAATCC TCGATGAGCT ACTCCAGTTG CCGGTCTACC GTGAGCATCT GGCTTTGCGC
GATAATCTGC AAGAGGTGAT GCTCGGTTAT TCCGATAGTA ACAAAGAGGG TGGTTTTTTG
GCTGCCAATT GGGCACTGTA TCGCGCCCAA GTCGAGTTGA ATACCGTGAC CGAACGCCAC
GGTGTTCGCC TCCGCTTCTT CCACGGGCGT GGTGGCGCGG TTGGTCGCGG TGGTGGACCG
GCGGGTCAGG CAATCCTCGC TCAACCTCCC GGTACGCTCC ATGGTCAGAT TAAGGTCACC
AATCAGGGTG AAGTCATCTC CGATCGCTAT CTCGATCCGC GTACCGCCCA TCGCCACCTC
GAACAGGTGG TGAATGCAGT ATTGCGCGCC GGCTTCCCCG GTATCGCCCG GTCACCTGAA
CCGGCTTGGC TGGAGGCAAT GGAACAGATG GCGCACACGG CGCGAACCGT GTATCGCCGG
TTAGTGTACG AAGACCCTGA TTTTCTGACC TATTTCCGCA ATGCTACGCC GGTCGCCGAG
CTGAGTCGCC TGCGGATCGG CTCACGTCCG GTCTCACGCC GGAAAAGTGA CCGGATCGAA
GACCTCCGCG CTATTCCGTG GGTCTTTAGC TGGATGCAAA CCCGCCATAC CCTGCCGGGT
TGGTTTGGGC TGGGGAGTGC GCTGAGCGAG TTCGTCGCCG CCGACCCGCA CCATCTTTAC
GTGCTGCGGG CAATGTACCG ACACTGGCCC TTCTTCACGA CCCTGCTCGA TAATGCGCAG
ATGATCATGC TCAAAGCCGA TATGAGCATC GCACGCAGTT ATGCCGGTCT TGTTCCCGAT
CAGGAGTTGG CGGCGCGTAT TTTTCAACAG ATCGAAGCCG AATATCGGCG TACTGAACAC
ATGATCTGCC AAATTACCGA GAGTCAAGAA TTGCTAGCGC ACCAACCGGT GCTGCAACGA
GCCATTCGAC AGCGTAATCC CTATATCGAT CCGCTCAGCT ATATTCAGAT CGAGCTGCTC
CGCCGAATCC GTAACGCACC ACCGGAAGAT CAGGATGAAA TAGAGACGGT ACTACTGATG
TCGATTAACG GCATTGCAGC CGGGTTGAAG AACACAGGCT AA
 
Protein sequence
MSGRTTAGEH DLLSANIRTL GDMLGRVITE QSGAATFELV ERVRLMAKEL RNGAPPAGTH 
VLQDLITGLS LPQLRNLVKA FTLYFGLVNL AEGVEQLRVL RSRDLRNAPA PRAESIADAI
ELLKRHGVPA AAIQEWIDQA LIMPVFTAHP TESRRRTILI KLRRIFDTLI DLTFGERLVL
PSDRQSALTR IERETVGLWQ TDDVRNRRPS VLDEVENGLF YFQTVLWDLI PEIYRETADA
LATAYPDHRW RLPPFLRFGS WMGGDRDGNP FVTPEVTVET VRLMRSAMLR YLINGIDRLI
TDLSQSVQQV PVDQAIFDRI AEYHELMPDA AATLNPHYRC EPYRQLCHFI QARLQNTLHY
TLSHTPRWGA DPPPPRLPTI YYHSRELLAD LDLIDTSLRR HGGAIIADGL LRDLRTNVAV
CRLHTATLDV RQHASRHTEA LTEILAGAGV VANYAALDEC ERVAVLSTEI RRPRPLTPIR
LGHFSPATAE TVQTFRMLAA ISEQLDPEIF QTYIISTTSQ VSDLLAVLLF CRDAGLYQPG
QYSRLDIVPL FETGEDLQRA PLILDELLQL PVYREHLALR DNLQEVMLGY SDSNKEGGFL
AANWALYRAQ VELNTVTERH GVRLRFFHGR GGAVGRGGGP AGQAILAQPP GTLHGQIKVT
NQGEVISDRY LDPRTAHRHL EQVVNAVLRA GFPGIARSPE PAWLEAMEQM AHTARTVYRR
LVYEDPDFLT YFRNATPVAE LSRLRIGSRP VSRRKSDRIE DLRAIPWVFS WMQTRHTLPG
WFGLGSALSE FVAADPHHLY VLRAMYRHWP FFTTLLDNAQ MIMLKADMSI ARSYAGLVPD
QELAARIFQQ IEAEYRRTEH MICQITESQE LLAHQPVLQR AIRQRNPYID PLSYIQIELL
RRIRNAPPED QDEIETVLLM SINGIAAGLK NTG