Gene Cagg_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0346 
Symbol 
ID7268447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp428462 
End bp428902 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID643565214 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002461728 
Protein GI219847295 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000103299 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000140959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATCT CGAGCAAAGG CGAATACGGG CTGCGCGCCG TTTTTGACCT GGCGCAGCAC 
TATGGCGAAG GGCCGATCCA GAGTGAGTCC ATTGCGATCC GGCAGGGCAT TCCGGTCAAT
TACCTGAACC AGTTACTGAT CACCCTGCGC CGGGCCGGCC TGGTCGAGAG TTTGCGTGGC
CCACAGGGCG GTCATCTGTT GGCCCGTTCG CCGGAAACGA TCTCACTCCT TGAGGTGCTG
ACGGTGCTCG AAGGCCCGAT TCTCCCTACC GAAGGTGGCC GCGATGATTT GCAACCGACG
GAGCCGCTCG ACCGTGCGTT GATCGATGAG GTCTGGAGTG AATTGCGGAC CTTGATCGAA
CAGCGTCTGG CCGGACTTAC CCTCGACGAC CTTTGTCAGC GTAAGCGCAG TCGCGATGGT
GCGGTGATGT ACTACATCTG A
 
Protein sequence
MRISSKGEYG LRAVFDLAQH YGEGPIQSES IAIRQGIPVN YLNQLLITLR RAGLVESLRG 
PQGGHLLARS PETISLLEVL TVLEGPILPT EGGRDDLQPT EPLDRALIDE VWSELRTLIE
QRLAGLTLDD LCQRKRSRDG AVMYYI